Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu04g1037 | ATGGCGGAAGAGCACAGATGCCAAGCACCTGAAGGCCATCGTCTCTGCGCTAATAATTGCGGCTTCTTCGGTAGCCCAGCTACCATGGATCTCTGCTCCAAATGTTACAGAGACTTCCGTCTTAAAGAACAAGAACAAGCCTCCACCAAATCCACCATCGAAGCCGCTCTCTCGGCCTCATCATCTCCTTCTCCTTCCTCTTCCCCAGTCGATCCTCCCCCCGTTCCCCCTGTTGTCGAATTGTCCCTGCCGGACTCCACCACAGATCTGACCATCCCTCCCCTCGCGGCCGTCGGATCTGAAGCCGCAAACCAACCGAATCCTACTCCGAACCCGAACCCCAACCCAAACCGTTGTTCGTCGTGCCGTAAGAAGGTGGGTTTGACCGGGTTCAAATGCAGATGCGGAACCACGTTCTGTGGGGCTCATAGGTACCCGGAGAAACACGGCTGCACCTTCGACTTCAAGTCAATCGGAAGAGAGGAGATCGCTCGAGCGAACCCCGTCGTCAAAGCCGATAAACTGGAAAGGATTTGA | 537 | 55.31 | MAEEHRCQAPEGHRLCANNCGFFGSPATMDLCSKCYRDFRLKEQEQASTKSTIEAALSASSSPSPSSSPVDPPPVPPVVELSLPDSTTDLTIPPLAAVGSEAANQPNPTPNPNPNPNRCSSCRKKVGLTGFKCRCGTTFCGAHRYPEKHGCTFDFKSIGREEIARANPVVKADKLERI | 178 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 24937955 | 24938491 | + | CmPI595203_04g010370.1 | Cmu04g1037 | 414622 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu04g1037 | 178 | MobiDBLite | consensus disorder prediction | 46 | 118 | - | - | |
Cmu04g1037 | 178 | ProSiteProfiles | Zinc finger A20-type profile. | 10 | 44 | IPR002653 | GO:0003677(InterPro)|GO:0008270(InterPro) | |
Cmu04g1037 | 178 | Gene3D | - | 96 | 174 | IPR035896 | - | |
Cmu04g1037 | 178 | SUPERFAMILY | AN1-like Zinc finger | 102 | 173 | IPR035896 | - | |
Cmu04g1037 | 178 | MobiDBLite | consensus disorder prediction | 48 | 65 | - | - | |
Cmu04g1037 | 178 | Gene3D | - | 1 | 69 | - | - | |
Cmu04g1037 | 178 | MobiDBLite | consensus disorder prediction | 66 | 80 | - | - | |
Cmu04g1037 | 178 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 15 | 58 | - | - | |
Cmu04g1037 | 178 | SMART | A20_3 | 13 | 37 | IPR002653 | GO:0003677(InterPro)|GO:0008270(InterPro) | |
Cmu04g1037 | 178 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 11 | 178 | IPR050652 | - | |
Cmu04g1037 | 178 | ProSiteProfiles | Zinc finger AN1-type profile. | 113 | 159 | IPR000058 | GO:0008270(InterPro) | |
Cmu04g1037 | 178 | FunFam | Zinc finger AN1-type containing 6 | 96 | 174 | - | - | |
Cmu04g1037 | 178 | SMART | AN1_Zf_4 | 119 | 156 | IPR000058 | GO:0008270(InterPro) | |
Cmu04g1037 | 178 | Pfam | AN1-like Zinc finger | 119 | 155 | IPR000058 | GO:0008270(InterPro) | |
Cmu04g1037 | 178 | Pfam | A20-like zinc finger | 14 | 37 | IPR002653 | GO:0003677(InterPro)|GO:0008270(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g2203 | Cmu-Chr2:35663318 | Cmu04g1037 | Cmu-Chr4:24937955 | 1.20E-39 | dispersed | |
Cmu04g1037 | Cmu-Chr4:24937955 | Cmu09g0411 | Cmu-Chr9:3914437 | 4.40E-27 | dispersed | |
Cmu04g1037 | Cmu-Chr4:24937955 | Cmu01g0334 | Cmu-Chr1:3467574 | 6.50E-39 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu04g1037 | - | - | - | 0.0 |