Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1131 ATGTGGGATCAAAAGCAACAAGTTTGTTGCTTTTGTTCTGATGGATCTCATCTCCAAACCTGCAAAGAGGGAAAACTTGATATATGGAAAAAGGCATTAATAGGTGCATCTCCTTTGGGAATTACCATCATTCTGATAATCTTTGTTATCATCATCTCCATCTACTACACAAGAAAAAGCTTATCAAACAAAGACAAAATTGAGGAAAGTATAAGGAGTTATTCCACACAAACACCCAAGAGATATAGTTACTCAAAGCTGAAGAAAATCACAGACTCCTTCAAGAACAAACTTGGTCAAGGAGGATTTAGCACTGTCTACAAAGGAAAGCTACCCGATGGGCGCGATGTAGCTGTGAAACTTTTGAATGAGTCCAGTGAAAATGGCCAAGATTTTATGAACGAGGTTGTTAGCATCACCAGAACTTCACATGTAAATATAGCTTCACTCTTAGGTTTCTGCTACGAGAGGAAGAAAAGAGCTTTGATTTATGAATATATGCCTAGAGGGTCATTGGACAAGTATATATCACACCAAGGGCCACAGAGAAACAATGTTGAGTTGGATTGGAACACACTTTATAGCATCATTATTGGCGTGGCACGAGGCTTAGAGTACTTGCATCGTGGTTGCATCACAAGGATTTTGCACTTTGACATCAAACCGCACAACATACTTTTGGATAGTGATTTTTGTCCCAAGATCTCAGACTTTGGGCTTGCCAAGCAATGCAAGGACAAAGAAAGTCATGTGTCAATGACAGGCGTAAAAGGGACGACAGGATTCATTGCACCCGAAGTAATATTCAGGAACTTTGGTAAGGTTTCTCACAAGTCTGATGTTTACAGCTACGGAATGTTGGTTCTTGAAATGGTGGGAGCAAGAAAGAATCCCAATGACAATGATGGAGTGGAGCAGAGGAGTGAAGAGTACTTTCCTGATTGGATATATAAAGATCTTACACAAAGTGAAATAGATGGAGGGTGTTGGTGGGGAAGCACGGAGGAAGAAGAAGAAATGGCAAGAAAAATGATAATTGTGGGGCTGCATTGTATTCAAACATTGCCCGACGACAGGCCGTCGATGACCGATGTGGTTGTGATGTTGGAAGGCAGTGTTGATGGCTTACAGATTCCACCAAAACCCAAATTGTTGGAACCTCCAGCCATTGAGCAGCCCCAACCTTCTTCCTCTTCATCCAACTGGATTTCTAATGATAGTTTGATATTCTAG 1233 41.12 MWDQKQQVCCFCSDGSHLQTCKEGKLDIWKKALIGASPLGITIILIIFVIIISIYYTRKSLSNKDKIEESIRSYSTQTPKRYSYSKLKKITDSFKNKLGQGGFSTVYKGKLPDGRDVAVKLLNESSENGQDFMNEVVSITRTSHVNIASLLGFCYERKKRALIYEYMPRGSLDKYISHQGPQRNNVELDWNTLYSIIIGVARGLEYLHRGCITRILHFDIKPHNILLDSDFCPKISDFGLAKQCKDKESHVSMTGVKGTTGFIAPEVIFRNFGKVSHKSDVYSYGMLVLEMVGARKNPNDNDGVEQRSEEYFPDWIYKDLTQSEIDGGCWWGSTEEEEEMARKMIIVGLHCIQTLPDDRPSMTDVVVMLEGSVDGLQIPPKPKLLEPPAIEQPQPSSSSSNWISNDSLIF 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25878396 25880068 + CmPI595203_04g011310.1 Cmu04g1131 414716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g1131 410 Gene3D Phosphorylase Kinase; domain 1 64 166 - -
Cmu04g1131 410 MobiDBLite consensus disorder prediction 391 410 - -
Cmu04g1131 410 FunFam serine/threonine-protein kinase PBS1-like 60 166 - -
Cmu04g1131 410 Gene3D Transferase(Phosphotransferase) domain 1 167 377 - -
Cmu04g1131 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu04g1131 410 ProSiteProfiles Protein kinase domain profile. 92 373 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu04g1131 410 PANTHER RUST RESISTANCE KINASE LR10-RELATED 60 388 IPR045874 GO:0004672(InterPro)
Cmu04g1131 410 MobiDBLite consensus disorder prediction 378 410 - -
Cmu04g1131 410 ProSitePatterns Protein kinases ATP-binding region signature. 98 120 IPR017441 GO:0005524(InterPro)
Cmu04g1131 410 SMART serkin_6 92 369 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu04g1131 410 Pfam Protein tyrosine and serine/threonine kinase 94 367 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu04g1131 410 SUPERFAMILY Protein kinase-like (PK-like) 67 369 IPR011009 -
Cmu04g1131 410 FunFam PR5-like receptor kinase 167 381 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1131 Cmu-Chr4:25878396 Cmu04g1134 Cmu-Chr4:25890939 1.90E-171 dispersed
Cmu04g1129 Cmu-Chr4:25870955 Cmu04g1131 Cmu-Chr4:25878396 1.00E-174 proximal
Cmu04g1131 Cmu-Chr4:25878396 Cmu04g1133 Cmu-Chr4:25887891 2.50E-110 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75482 PF00069 Pkinase 5.40E-47 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1131 - - - 0.0