Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu04g1133 | ATGAATGAAGTTGTTAGCATCACCAAAACATCGCATGTAAACATAGCCACCCTCTTGGGATTTTGCTATGAACGAAGTACAAGGGCTTTAGTTTATGAATATATGTCTAATGGGTCATTGGACAAGTATATATTTCATAGAGGGCTACAGATCAAAAATGGTGTGGAGTTGAGTTTGAGCACACTCTATGGCATTGTTATTGGTGTGGGTCGAGGCTTAGAGTATTTGCATTGCCACTGCAACACAAAGATCTTGCATTTTGACATCAAACCAGACAACATTCTTTTGGACAATAATTTCTGCCCCAAGATCTCAGACTTTGGACTTGCAAAGCAATGCATGGCCAGAGAGAGTCATGTGTCAATGACAGGTATGAAAGGGACGGTAGGATTCATGGCACCTGAAGTAATATTTAGAAATCTTGGCAAAGTTTCCCACAAGTCTGATGTTTATAGTTATGGAATGTTGGTTCTTGAGATGTTGGGTGAAAAGAAGTGTCCCAATGAAAGAGTGGAGCAGAGCAGTGAAGGGTACTTTCCTGATTGGATATATAACAATCTTACACGACATGAAATAGATGAAGGTTCTAATTGCTGGGGCAACACAGAAGAGGAAAAACAAATGGCAAGAAAAATGATAATTGTGGGGTTGCATTGCATTCAGACTTCGCCCCATGACAGGCCGTCGATGACCCATGTGGTTGCAATGTTAGAAGGCAGTATTGATGGCTTACAAATTCCACCAAAACCCAACTTGTATGGACCTCCTGCGACTGATCTACTCCAAGCTACTGCTTCTTCTTCTTCATCCAACTCGTACTAA | 822 | 41.24 | MNEVVSITKTSHVNIATLLGFCYERSTRALVYEYMSNGSLDKYIFHRGLQIKNGVELSLSTLYGIVIGVGRGLEYLHCHCNTKILHFDIKPDNILLDNNFCPKISDFGLAKQCMARESHVSMTGMKGTVGFMAPEVIFRNLGKVSHKSDVYSYGMLVLEMLGEKKCPNERVEQSSEGYFPDWIYNNLTRHEIDEGSNCWGNTEEEKQMARKMIIVGLHCIQTSPHDRPSMTHVVAMLEGSIDGLQIPPKPNLYGPPATDLLQATASSSSSNSY | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 25887891 | 25888712 | + | CmPI595203_04g011330.1 | Cmu04g1133 | 414718 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu04g1133 | 273 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 84 | 96 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu04g1133 | 273 | FunFam | PR5-like receptor kinase | 35 | 249 | - | - | |
Cmu04g1133 | 273 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 35 | - | - | |
Cmu04g1133 | 273 | SMART | serkin_6 | 1 | 237 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu04g1133 | 273 | ProSiteProfiles | Protein kinase domain profile. | 1 | 241 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu04g1133 | 273 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 238 | IPR011009 | - | |
Cmu04g1133 | 273 | Gene3D | Transferase(Phosphotransferase) domain 1 | 36 | 243 | - | - | |
Cmu04g1133 | 273 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 1 | 256 | IPR045874 | GO:0004672(InterPro) | |
Cmu04g1133 | 273 | PIRSF | ILK | 1 | 245 | - | - | |
Cmu04g1133 | 273 | Pfam | Protein kinase domain | 2 | 235 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu04g1133 | 273 | MobiDBLite | consensus disorder prediction | 247 | 273 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu04g1133 | Cmu-Chr4:25887891 | Cmu05g1787 | Cmu-Chr5:27979892 | 4.30E-58 | dispersed | |
Cmu04g1131 | Cmu-Chr4:25878396 | Cmu04g1133 | Cmu-Chr4:25887891 | 2.50E-110 | proximal | |
Cmu04g1133 | Cmu-Chr4:25887891 | Cmu04g1134 | Cmu-Chr4:25890939 | 4.10E-117 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75483 | PF00069 | Pkinase | 3.60E-38 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu04g1133 | - | - | - | 0.0 |