Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1133 ATGAATGAAGTTGTTAGCATCACCAAAACATCGCATGTAAACATAGCCACCCTCTTGGGATTTTGCTATGAACGAAGTACAAGGGCTTTAGTTTATGAATATATGTCTAATGGGTCATTGGACAAGTATATATTTCATAGAGGGCTACAGATCAAAAATGGTGTGGAGTTGAGTTTGAGCACACTCTATGGCATTGTTATTGGTGTGGGTCGAGGCTTAGAGTATTTGCATTGCCACTGCAACACAAAGATCTTGCATTTTGACATCAAACCAGACAACATTCTTTTGGACAATAATTTCTGCCCCAAGATCTCAGACTTTGGACTTGCAAAGCAATGCATGGCCAGAGAGAGTCATGTGTCAATGACAGGTATGAAAGGGACGGTAGGATTCATGGCACCTGAAGTAATATTTAGAAATCTTGGCAAAGTTTCCCACAAGTCTGATGTTTATAGTTATGGAATGTTGGTTCTTGAGATGTTGGGTGAAAAGAAGTGTCCCAATGAAAGAGTGGAGCAGAGCAGTGAAGGGTACTTTCCTGATTGGATATATAACAATCTTACACGACATGAAATAGATGAAGGTTCTAATTGCTGGGGCAACACAGAAGAGGAAAAACAAATGGCAAGAAAAATGATAATTGTGGGGTTGCATTGCATTCAGACTTCGCCCCATGACAGGCCGTCGATGACCCATGTGGTTGCAATGTTAGAAGGCAGTATTGATGGCTTACAAATTCCACCAAAACCCAACTTGTATGGACCTCCTGCGACTGATCTACTCCAAGCTACTGCTTCTTCTTCTTCATCCAACTCGTACTAA 822 41.24 MNEVVSITKTSHVNIATLLGFCYERSTRALVYEYMSNGSLDKYIFHRGLQIKNGVELSLSTLYGIVIGVGRGLEYLHCHCNTKILHFDIKPDNILLDNNFCPKISDFGLAKQCMARESHVSMTGMKGTVGFMAPEVIFRNLGKVSHKSDVYSYGMLVLEMLGEKKCPNERVEQSSEGYFPDWIYNNLTRHEIDEGSNCWGNTEEEKQMARKMIIVGLHCIQTSPHDRPSMTHVVAMLEGSIDGLQIPPKPNLYGPPATDLLQATASSSSSNSY 273
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 25887891 25888712 + CmPI595203_04g011330.1 Cmu04g1133 414718
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g1133 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu04g1133 273 FunFam PR5-like receptor kinase 35 249 - -
Cmu04g1133 273 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Cmu04g1133 273 SMART serkin_6 1 237 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu04g1133 273 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu04g1133 273 SUPERFAMILY Protein kinase-like (PK-like) 1 238 IPR011009 -
Cmu04g1133 273 Gene3D Transferase(Phosphotransferase) domain 1 36 243 - -
Cmu04g1133 273 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 256 IPR045874 GO:0004672(InterPro)
Cmu04g1133 273 PIRSF ILK 1 245 - -
Cmu04g1133 273 Pfam Protein kinase domain 2 235 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu04g1133 273 MobiDBLite consensus disorder prediction 247 273 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1133 Cmu-Chr4:25887891 Cmu05g1787 Cmu-Chr5:27979892 4.30E-58 dispersed
Cmu04g1131 Cmu-Chr4:25878396 Cmu04g1133 Cmu-Chr4:25887891 2.50E-110 proximal
Cmu04g1133 Cmu-Chr4:25887891 Cmu04g1134 Cmu-Chr4:25890939 4.10E-117 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75483 PF00069 Pkinase 3.60E-38 CL0016 Cmu PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1133 - - - 0.0