Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1176 ATGTCTTCTCTCCCATTTGCTTTCTTCTTCCTCCTCCTCTCCTTCCATTTCTTCTCGGCAATTAGCATCGATTTCCTCGTCGGCGATGAGGATGGCTGGGCAGTCCCTAAACCAAAAGAAGCTGACAAATACAACAAATGGGCTTCCCACAACAGATTCAATATCGATGACACTGTCCATTTCAAGTACGAGAAAGATTCGGTGATGATGGTGACAGAGGAAGAGTACAAACAGTGTTTTTCTTCAAAGCCTCTGTTTTATGAGAACAATGGTGATAGTGTTGTGAAACTTGATAGAGCCGGTTTGTTCTATTTCATTAGTGGAGTTTCAGGGCATTGTCAGAAAGGCCAAAGAATGATAATCAAAGTGTTGGAACCTATAAATCCTCCTCACCCACCAACTGCTCCACCAAATAACAAGAATGCTGCAGCAGCCTCTTCTAATTTGCTCTCTGTTTCATCTTCAATCTTGGGAGTGTTCTTGATGTTGTTCTTTGCTCTGTTTCTGTCCATTTGA 516 42.25 MSSLPFAFFFLLLSFHFFSAISIDFLVGDEDGWAVPKPKEADKYNKWASHNRFNIDDTVHFKYEKDSVMMVTEEEYKQCFSSKPLFYENNGDSVVKLDRAGLFYFISGVSGHCQKGQRMIIKVLEPINPPHPPTAPPNNKNAAAASSNLLSVSSSILGVFLMLFFALFLSI 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26324926 26325547 + CmPI595203_04g011760.1 Cmu04g1176 414761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g1176 171 Gene3D - 22 126 IPR008972 -
Cmu04g1176 171 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055(InterPro)
Cmu04g1176 171 PANTHER BLUE COPPER PROTEIN 16 133 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cmu04g1176 171 Pfam Plastocyanin-like domain 40 117 IPR003245 GO:0009055(InterPro)
Cmu04g1176 171 CDD OsENODL1_like 24 124 IPR041846 -
Cmu04g1176 171 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Cmu04g1176 171 FunFam Early nodulin-like protein 1 22 128 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1176 Cmu-Chr4:26324926 Cmu09g1877 Cmu-Chr9:34894225 4.30E-32 dispersed
Cmu04g1176 Cmu-Chr4:26324926 Cmu10g1367 Cmu-Chr10:6645634 2.70E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1176 - - - 0.0