Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1224 ATGTGGGAGCTGAGTCGCGCCAACACTTGGAGGAATGAGATAAGCTCCCATTCACGAGGCCCAGAAGGTTTAATAGAATCAGAATGCGCGGGTGCCCTTCAGAACTACCTTGGAAAGCGCAGTCGTGAACCAATGCCCAGAACTGCCAAAACCGAGAACTCAGTCACGCGTCTGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGATCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTCGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCCCTCGGATGGTTCCACAATCGGTTCTACGTACAACAATGTGTTGAACTACTTCAACAAGTCTGCGTATATTATCGAAAAAGATCTGAGCGAGTGCTTTTCTTAAGCAAAAATGCTAATTGTGCTATTGCGTTCCATTACAAAGTCTTTAGACACCCTCCAATGCTTCAGATTCCGCGACTGACCAGCTCCCTCAGGGAGCCATTCGATGTCGACCAGGCGTATCTCCATCGCAAGCTCCTTCTTCAAAATCACAAACCGTCCCACTCCATAGCTTCATTGGGCGAGTCAGAACTAGCGCGGAAGATAGTGTATCAATGGGATGAAGCATCTTTTGAAGTTCGACAAGCCTATAAGCATTTCATTGCGGGAGTTGTTGGGTTGGTGGACAGAGAAGTACCATCCGAGGAGCTTGGTGAGGTAGCACTGACTATTTATTGCCTTTTTGGCGAGCAAAAAGAAGAGAATGATCTCGACTATATTGCTAAAAACATGGAAGAATTGCAAAAGCTTATTGGCAATACAGTTTCAGATGCTAGGCTGCAGAAAGTTATTTCTCTAGCTCAGAAACTATTTATTTTGCAGCCAAGGGATCACGCAACTGCATTGCTAGCAGAGAAGCATGTTAACAAGGGTGACTCCTCTGTAGAGTTTGGCGCTGATCTTGCTTTTAGAGAACCTACTAGGTTTATGGTGGATGCGTCTCTGGAAAATTCAGATTTACTGGGCAAGGATATTGCTGCACCTACATTTTATGACAGACAACATGTGCAAGACCATTCCATGAACTTTGATCTCTCTAATGAAAGAGGAAAGTTAAATTTGAGTTGGTTGAGGGATGCATGTGACGAGATAACAAGAAAAAGTACCTCACAACTCTCCCTTGATGAGCTTGCAATGGCCATTTGCCGAGTCCTTCATTCAGAAAAACCTGGCGAGGAGATAGCTGCAGATCTATTGGATCTTGTTGGTGATGGAGCATTTGAGTTTGTTCAAGATCTTATTTCACACCGAAGGGAACTTGTTGATGATATTCATCATGGGTTAACAATAATAAAATCTGAAAAACCAAATTCAAGCTCACAATCACGAATGCCTAGCTATGGAACTCAGGTTACTGTTCAAACAGAATCAGAGAAACAAATTGATAAGCTTCGACGTAAGGAGGAAAAGAGAAATAAACGAGGAATTGAATATGATTCTGAAAGTGATTTCTCTGCTGTAAGCTTTTCTTCTCTAGTTCAAGCAAGCCAAAGGAAAAGTCCATTTGAAGATCTTATTGGTTCTGGTGAGGGCTCTAACTCCCTTACAGTTAATGCACTTCCTCAAGGAACACAAAGGAAGCATTTTAAGGGATATGAGGAGGTAATTATCCCTCCAATCCCAGCAGCACAAATGAAACCTGGTGAAAAGCTGATTGAAATAAAGGAGTTGGATGATTTTGCTCAAGCTGCTTTTCGTGGATTTAAATACTTAAACCGCATACAGAGTCGCATTTTTGACACTGTTTATAACACCAATGAGAATATACTAGTCTGTGCTCCAACAGGGGCTGGGAAAACTAATATAGCGATGATCTCCATTCTCCACGAGATTTCACAGCACTTCAAGGATGGATATTTGCATAAAGATGAATTTAAGATAGTTTATGTTGCTCCTATGAAGGCATTGGCTGCAGAGGTCACATCTACTTTTAGCCATCGTTTATCACCCTTGAATGTTACTGTAAGAGAACTAACTGGAGACATGCAACTTTCAAAGAATGAACTTGAAGAAACTCAGATGATAGTGACAACACCTGAGAAATGGGATGTCATTACTAGAAAAAGCAGTGACATGTCACTCTCAATGTTAGTCAAACTCTTAATTATTGACGAGGTGCATCTTCTAAATGATGACCGAGGGCCTGTAATTGAGGCATTAGTTGCACGAACTCTTCGTCAGGTGGAGTCAACACAAACAATGATACGGATTGTTGGCCTTTCAGCCACCCTCCCTAATTACTTAGAGGTTGCACAGTTTCTTAGAGTGAATCCAGGAACAGGACTTTTCTTCTTTGATTCTAGCTACCGTCCTGTGCCTCTTGCACAACAATATATTGGTATCAGCGAGCATAACTTTGCAGCTCGCAATGAATTGTTAAATGAAATATGCTATAAGAAGGTTGTTGATTCATTAAAGCATGGGCATCAAGCAATGGTGTTTGTTCATTCTCGAAAGGACACAGCAAAGACAGCAGAGAAACTGGTCGAAATTGGTCGGAAGTATGATGATCTTGAGGTATTTAAGAATGATGCACACCCGCAATTTGGTATTATCAAGAAAGAAGTCATCAAATCCAGGAATAAAGATCTAGTAGAACTTTTTAATTTTGGGATTGGTGTACATCATGCTGGAATGCTACGTTCTGATAGAGGTTTAACCGAAAGACTTTTCTCTGATGGACTGTTGAAGGTTCTTGTTTGTACAGCCACCTTAGCATGGGGTGTAAATCTGCCTGCTCATACGGTTGTTATAAAGGGCACCCAATTATATGATCCAAAAGCTGGTGGATGGCGAGATTTGGGTATGCTTGATGTCATGCAGATTTTTGGACGAGCTGGGAGACCTCAGTTTGACAAAAGTGGTGAAGGCATCATAATTACATCTCACGATAAACTTGCCCATTATTTGCGATTGCTTACAAGTCAGCTCCCTATAGAGAGTCAGTTTATTGGTTCTTTGAAAGATAATTTGAATGCGGAGGTTGCACTGGGTACTGTAACGAATGTGAAGGAAGCTTGTGCCTGGCTTGGATATACATATCTATTTATAAGGATGAGACTAAATCCGCTGGCATATGGCATTGGATGGGATGAGGTCATGGCCGATCCATCTTTGAGTTCAAAGCAAAGAGCTCTCATAACAGATGCTGCACGTGCACTTGACAAATCAAAGATGATGCGTTTTGATGAAAAAAGTGGCAACTTTTATTGTACAGAGCTCGGCCGCATTGCCAGCCACTTCTATATTCAGTATTCCAGTGTTGAAACATATAATGAGATGTTGAGACGTCATATGAATGACAGTGAGATTATTGACATGGTCGCTCATTCTTCTGAGTTTGAAAATATTGTTGTTCGAGATGAGGAGCAGAGTGAGCTGGAGATGTCAGTACGAACATCATGTCCCTTGGAAGTTAAAGGTGGCCCATCCAATAAACATGGAAAAATTTCCATTCTTATTCAGTTGTACATTTCCAGAGGTTCCATCGATACCTTCTCATTAGTCTCCGATGCTGCTTATATAAGTGCTAGCTTGGCTCGTATTATGCGAGCTCTATTTGAAATATGTTTGAGAAGGGGTTGGTGCGAAATGACTTTGTTCATGTTGGAATACTGCAAAGCTGTTGATCGTCGAATATGGCCACACCAGCATCCTCTAAGACAATTTGACAAGGATCTTTCTTCAGATATATTGCGCAAGCTTGAGGAGCGAGAGGCTGATTTGGATCGTCTACAGGAGATGCAGGAAAAAGACATAGGAGCATTGATCCGTTATGCACCTGGTGGAAGATTGGTTAAGCAGTATTTAGGATATTTTCCACTAATCCAGTTATCAGCAACTGTCAGCCCAATAACAAGAACAGTCCTAAAGGTTGAGGTGGTCATAACAGCCGACTTCATATGGAAAGATCGTTTTCATGGAGGTTCACAACGCTGGTGGATACTAGTTGAGGATAACGAGAATGACCATATTTATCACTCCGAGCTTTTCACTCTGGCAAAGAAGAAGGCTAGAGAGCCTCAAAGGCTTTCCTTCACAGTCCCAATATTTGAGCCACATCCTCCTCAATATTATATTCATGCCGTTTCTGACTCCTGGCTGCAAGCAGAAGCATTTTACACCATATCTTTCCAAAATTTAGCACTGCCGGAGGCCCGTACGTCGCACACTGAGCTCCTAGACTTGAAACCTCTTCCAATAACTGCTCTTGGTAACAGAAGTTACGAATCCCTGTATAAATTTTCACATTTTAATCCAATACAAACACAGATTTTTCATGTGTTGTATCATACAGATGATAACATTCTGTTGGGTGCTCCCACTGGGAGTGGAAAAACCATATCTGCTGAACTTGCTATGCTTCGTCTCTTCAATACTCAGCCTGATATGAAGGTTGTCTACATAGCACCTTTGAAGGCCATTGTTCGTGAAAGAATGAATGACTGGAAAAATTGTCTTGTTTCTCGGCTCGGCAAAAAAATGGTTGAAATGACGGGAGATTATACCCCTGATTTGATGGCACTTTTGTCAGCAGATATTATAATATCAACCCCCGAAAAGTGGGATGGTATTAGTAGAAATTGGCATAGTCGAAGCTATGTTACAAAGGTTGGACTAATGATTCTGGATGAGATCCATTTATTGGGAGCAGATCGTGGTCCCATTCTTGAGGTTATTGTTTCAAGGATGAGGTATATATCATCACAGACCGAGCGAAAAGTTAGATTTGTAGGCCTTTCAACTGCTTTAGCGAATGCAAGTGATTTGGGTGACTGGCTAGGTGTTGGAGAAAATGGACTTTTCAATTTCAAACCAAGTGTAAGGCCAGTGCCTCTTGAAGTTCATATTCAGGGATATCCTGGAAAGTTCTACTGCCCTAGGATGAACAGTATGAATAAACCAACTTATGCTGCCATCTGCACCCATTCACCAACCAAGCCAGTTCTTATATTCGTCTCATCTCGTCGCCAGACAAGACTCACGGCATTGGATCTTATTCAGTTTGCAGCTTCAGATGAGCATCCAAGGCAATTTCTTAATATGGCCGAAGACGAGCTTCAGATGATCCTTTGTCAAGTCATTGATCAAAATCTCAGGCACACTTTGCAGTTTGGTATCGGGCTACACCATGCAGGTCTAAATGATGGGGACAGGTCTATGGTTGAGGAACTGTTTGCAAACAACAAAATTCAGGTATTGGTTTGTACTAGCACATTGGCTTGGGGTGTGAACCTTCCTGCACATCTAGTTATTATCAAGGGAACAGAATATTATGATGGAAAATCAAAGAGATACGTTGATTTTCCAATCACAGATATTCTGCAAATGATGGGTCGTGCAGGACGACCACAGTATGATCAACATGGAAAAGCAGTTATTCTTGTTCATGAACCCAAAAAGAGCTTTTATAAGAAGTTTTTGTACGAACCATTCCCAGTTGAGAGTAGTCTGAAGGAGCAGTTGCATGACCATATCAATGCTGAGATAGTTTCGGGCACCATTTGTCATAAAGAGGATGCAGTACACTATCTTAGCTGGACATATTTGTTTCGTAGGCTGATGGTAAATCCTGCTTACTATGGGTTGGATAGCATGGAACCTGAAATTCTAAGTTCGTACTTATCTAGGTTAGTACAAAGCACATTTGAGGATCTCGAGGATAGTGGATGCATAAAGATGGATGAAGACAGAGTGGAGCCAATGATGCTGGGTTCAATAGCATCTCAGTATTACCTCAGCTACATTACTTTATCAATGTTTGGCTCAAATATAGGTCCAGATACGTCAGTTGAAGTATTTTTGCATATCCTTTCCGCCGCTTCTGAATATGATGAACTTCCTGTGCGGCATAATGAGGAAAATTACAATGCTGCTCTATCTGAGAGGGTTCGATATAAGGTGGACAAAGATCGACTTGATGATCCACATGTGAAGGCAAATTTACTTTTTCAGGCACACTTTTCTCAGTTGGAATTACCAATCAGTGACTACATTACCGACTTAAAGTCAGTGTTGGATCAGAGTATACGCATTATTCAGGCCATGATTGATATATGTGCCAATAGTGGATGGCTATCAAGCTCGATTACATGCATGCGTCTATTGCAAATGGTCATGCAGGGCTTGTGGTTTGATGTGGATTCAGCATTATGGATGCTACCATGCATGAATGATGACCTTGCAAATTCACTTAAAAAATCGGGATATCTAACTCTGCAGCAACTGTTGAATCTTCCCAAGACAGCTTTGCATAATTTGATTGGAAATTTTCCTGCTTCAAAATTAACTCAGGATTTGCAGATGTTTCCTCGTGTCCAAATGAAGATAAAACTTCAAAGGAAGGACGACGACGATGGAAAAGATCCCTCTCTTAACATTAGATTGGAGAAGATAAGTTCGAGGAAAAACAGAACCAGGGCATATGCACCACGGTTTCCCAAGATGAAAGATGAAGCATGGTGGCTTGTACTTGGTAACACCTCTACGTCGGAACTGTATGCTTTAAAGAGAGTTTCTTTCGCTGATCGCTTGGTCACAACCATGCAGTTGCCTCCAAAAAGAAATGACTTCCAGGAAATGAAATTGATTTTGGTCTCAGATTGTTATCTTGGTTATGAGCAAGAATACTCCATTAATGCATTTCTAGCTGGCCATGATGGGGCTTACAGTTGA 7035 41.62 MWELSRANTWRNEISSHSRGPEGLIESECAGALQNYLGKRSREPMPRTAKTENSVTRLIINSVVVVGLYYGFLITFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPLGWFHNRFYVQQCVELLQQVCVYYRKRSERVLFLSKNANCAIAFHYKVFRHPPMLQIPRLTSSLREPFDVDQAYLHRKLLLQNHKPSHSIASLGESELARKIVYQWDEASFEVRQAYKHFIAGVVGLVDREVPSEELGEVALTIYCLFGEQKEENDLDYIAKNMEELQKLIGNTVSDARLQKVISLAQKLFILQPRDHATALLAEKHVNKGDSSVEFGADLAFREPTRFMVDASLENSDLLGKDIAAPTFYDRQHVQDHSMNFDLSNERGKLNLSWLRDACDEITRKSTSQLSLDELAMAICRVLHSEKPGEEIAADLLDLVGDGAFEFVQDLISHRRELVDDIHHGLTIIKSEKPNSSSQSRMPSYGTQVTVQTESEKQIDKLRRKEEKRNKRGIEYDSESDFSAVSFSSLVQASQRKSPFEDLIGSGEGSNSLTVNALPQGTQRKHFKGYEEVIIPPIPAAQMKPGEKLIEIKELDDFAQAAFRGFKYLNRIQSRIFDTVYNTNENILVCAPTGAGKTNIAMISILHEISQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARNELLNEICYKKVVDSLKHGHQAMVFVHSRKDTAKTAEKLVEIGRKYDDLEVFKNDAHPQFGIIKKEVIKSRNKDLVELFNFGIGVHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRLLTSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDEVMADPSLSSKQRALITDAARALDKSKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEIIDMVAHSSEFENIVVRDEEQSELEMSVRTSCPLEVKGGPSNKHGKISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWCEMTLFMLEYCKAVDRRIWPHQHPLRQFDKDLSSDILRKLEEREADLDRLQEMQEKDIGALIRYAPGGRLVKQYLGYFPLIQLSATVSPITRTVLKVEVVITADFIWKDRFHGGSQRWWILVEDNENDHIYHSELFTLAKKKAREPQRLSFTVPIFEPHPPQYYIHAVSDSWLQAEAFYTISFQNLALPEARTSHTELLDLKPLPITALGNRSYESLYKFSHFNPIQTQIFHVLYHTDDNILLGAPTGSGKTISAELAMLRLFNTQPDMKVVYIAPLKAIVRERMNDWKNCLVSRLGKKMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERKVRFVGLSTALANASDLGDWLGVGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNMAEDELQMILCQVIDQNLRHTLQFGIGLHHAGLNDGDRSMVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEQLHDHINAEIVSGTICHKEDAVHYLSWTYLFRRLMVNPAYYGLDSMEPEILSSYLSRLVQSTFEDLEDSGCIKMDEDRVEPMMLGSIASQYYLSYITLSMFGSNIGPDTSVEVFLHILSAASEYDELPVRHNEENYNAALSERVRYKVDKDRLDDPHVKANLLFQAHFSQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWFDVDSALWMLPCMNDDLANSLKKSGYLTLQQLLNLPKTALHNLIGNFPASKLTQDLQMFPRVQMKIKLQRKDDDDGKDPSLNIRLEKISSRKNRTRAYAPRFPKMKDEAWWLVLGNTSTSELYALKRVSFADRLVTTMQLPPKRNDFQEMKLILVSDCYLGYEQEYSINAFLAGHDGAYS 2344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26732885 26773947 + CmPI595203_04g012240.1 Cmu04g1224 414809

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g1224 2344 PANTHER DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED 471 1431 IPR050474 -
Cmu04g1224 2344 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1754 1962 IPR001650 -
Cmu04g1224 2344 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1547 1722 IPR014001 -
Cmu04g1224 2344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 641 875 IPR027417 -
Cmu04g1224 2344 CDD SF2_C_Ski2 1729 1917 - -
Cmu04g1224 2344 Gene3D - 1100 1190 IPR036388 -
Cmu04g1224 2344 Pfam Helicase conserved C-terminal domain 1812 1904 IPR001650 -
Cmu04g1224 2344 Pfam Helicase conserved C-terminal domain 983 1069 IPR001650 -
Cmu04g1224 2344 Gene3D C2 domain 2222 2335 IPR035892 -
Cmu04g1224 2344 Gene3D - 2029 2165 - -
Cmu04g1224 2344 FunFam Activating signal cointegrator 1 complex subunit 3 1730 1934 - -
Cmu04g1224 2344 CDD DEXHc_ASCC3_1 691 886 - -
Cmu04g1224 2344 PIRSF BRR2 261 2341 - -
Cmu04g1224 2344 Pfam Sec63 Brl domain 1191 1497 IPR004179 -
Cmu04g1224 2344 Coils Coil 1348 1372 - -
Cmu04g1224 2344 FunFam U5 small nuclear ribonucleoprotein helicase 1192 1334 - -
Cmu04g1224 2344 SUPERFAMILY Sec63 N-terminal domain-like 1219 1394 - -
Cmu04g1224 2344 Gene3D - 679 890 IPR027417 -
Cmu04g1224 2344 MobiDBLite consensus disorder prediction 578 594 - -
Cmu04g1224 2344 FunFam RNA helicase, activating signal cointegrator 1 1393 1501 - -
Cmu04g1224 2344 Gene3D - 1935 2028 IPR036388 -
Cmu04g1224 2344 Pfam Ycf1 138 200 IPR008896 GO:0016020(InterPro)
Cmu04g1224 2344 Pfam Ycf1 62 137 IPR008896 GO:0016020(InterPro)
Cmu04g1224 2344 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 917 1115 IPR001650 -
Cmu04g1224 2344 Gene3D - 1336 1390 - -
Cmu04g1224 2344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1425 1722 IPR027417 -
Cmu04g1224 2344 SMART helicmild6 1813 1905 IPR001650 -
Cmu04g1224 2344 SMART helicmild6 978 1070 IPR001650 -
Cmu04g1224 2344 FunFam Activating signal cointegrator 1 complex subunit 1502 1729 - -
Cmu04g1224 2344 SUPERFAMILY E set domains 2208 2333 IPR014756 -
Cmu04g1224 2344 MobiDBLite consensus disorder prediction 552 594 - -
Cmu04g1224 2344 FunFam Activating signal cointegrator 1 complex subunit 3 2028 2164 - -
Cmu04g1224 2344 FunFam U5 small nuclear ribonucleoprotein helicase 891 1093 - -
Cmu04g1224 2344 CDD SF2_C_Ski2 890 1081 - -
Cmu04g1224 2344 Gene3D C2 domain 1393 1501 IPR035892 -
Cmu04g1224 2344 Pfam Sec63 Brl domain 2021 2332 IPR004179 -
Cmu04g1224 2344 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 700 882 IPR014001 -
Cmu04g1224 2344 SUPERFAMILY Winged helix DNA-binding domain 1933 2033 IPR036390 -
Cmu04g1224 2344 FunFam U5 small nuclear ribonucleoprotein helicase 1335 1391 - -
Cmu04g1224 2344 SUPERFAMILY Winged helix DNA-binding domain 1098 1203 IPR036390 -
Cmu04g1224 2344 SMART AAA_5 1552 1702 IPR003593 GO:0016887(InterPro)
Cmu04g1224 2344 SMART AAA_5 705 1022 IPR003593 GO:0016887(InterPro)
Cmu04g1224 2344 MobiDBLite consensus disorder prediction 147 193 - -
Cmu04g1224 2344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 885 1098 IPR027417 -
Cmu04g1224 2344 Gene3D - 1730 1934 IPR027417 -
Cmu04g1224 2344 MobiDBLite consensus disorder prediction 552 577 - -
Cmu04g1224 2344 Gene3D - 1192 1334 - -
Cmu04g1224 2344 FunFam U5 small nuclear ribonucleoprotein helicase 1100 1191 - -
Cmu04g1224 2344 CDD DEXHc_ASCC3_2 1537 1725 - -
Cmu04g1224 2344 FunFam DExH-box ATP-dependent RNA helicase DExH14 2224 2334 - -
Cmu04g1224 2344 Pfam DEAD/DEAH box helicase 1539 1705 IPR011545 GO:0003676(InterPro)|GO:0005524(InterPro)
Cmu04g1224 2344 FunFam U5 small nuclear ribonucleoprotein helicase 1935 2028 - -
Cmu04g1224 2344 Gene3D - 891 1093 IPR027417 -
Cmu04g1224 2344 SMART ultradead3 1534 1738 IPR014001 -
Cmu04g1224 2344 SMART ultradead3 687 898 IPR014001 -
Cmu04g1224 2344 Gene3D - 1502 1729 IPR027417 -
Cmu04g1224 2344 MobiDBLite consensus disorder prediction 168 193 - -
Cmu04g1224 2344 Pfam DEAD/DEAH box helicase 692 866 IPR011545 GO:0003676(InterPro)|GO:0005524(InterPro)
Cmu04g1224 2344 SMART Sec63_2 2021 2334 IPR004179 -
Cmu04g1224 2344 SMART Sec63_2 1191 1498 IPR004179 -
Cmu04g1224 2344 FunFam RNA helicase, activating signal cointegrator 1 679 890 - -
Cmu04g1224 2344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1724 1933 IPR027417 -
Cmu04g1224 2344 SUPERFAMILY Sec63 N-terminal domain-like 2054 2211 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1224 K18663 - - csv:101222457 4003.75
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1224 Cmu-Chr4:26732885 Cmu05g1376 Cmu-Chr5:17353486 0.00E+00 dispersed
Cmu04g1224 Cmu-Chr4:26732885 Cmu10g1446 Cmu-Chr10:8905091 3.50E-15 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g647 . Blo16g00171 . . . Bpe13g00309 Bma06g00154 . Cmo13g01125 . . . . . . Cpe20g00069 . . . . . . . . . . . . . . . Cone2ag0807 . . . Lsi02g00115 Csa01g00593 Chy12g01505 Cme12g01949 . . Bda11g01720 . . . . . . . . Cma13g01078 . Car13g00915 . . . Bhi08g01095 . . . . . . Cla04g01159 Cam04g1218 Cec01g1729 Cco01g1775 Clacu04g1245 Cmu04g1224 Cre01g1520 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009577 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32