Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu04g1310 ATGCTTGTGGAGGGTATTTTTCAGGTTGTTACATGTGGATTTCCTCCACTAGAGGAGAGGGACAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGAGGTGGTGCTCTACCAAAAGAGGAGACTCTCAGGCTTGCAGATCTGGAGAAGAAAGCTTTTAATGATATGTTTGTCATACTTTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTATTTGTTTTGATGGGAAATTTTTGTTCCCGTCCATGCAATCTTGCCTTTAATTCTTTCTCGAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCAAGATTACAAGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGACCATCAACCGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAGATGCACGTCCCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACCCAGGAAATTGTATTTTTCCGACAAGACCTTCTTTATAGAATGCGCCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGTGATCCTTTCGAGCATCTTGTTGCGACTATAACTCATCAAAGTCATCTCTGCCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATACCCTACTCCTCATGTGATAGTTTTGGGGGATAGAAGTAAGCAACAAGCATTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCTTGCAATCAAGAAGTTGAACTGTCTGCCTTGTTAACCGAAAGGAGCGTTAGAAGAATGAGGGAAATGTTTTCAACATCCAACTTTGGTAAATGTGGTTGTCCATACTTTTTGAGAGTTGCTGAAGTGTAG 999 41.94 MLVEGIFQVVTCGFPPLEERDKSLKLLAGQDFFGGGALPKEETLRLADLEKKAFNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSRPCNLAFNSFSSLRLQFGKLGKMIAAHPRLQEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSALLTERSVRRMREMFSTSNFGKCGCPYFLRVAEV 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27397056 27400538 + CmPI595203_04g013100.1 Cmu04g1310 414895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu04g1310 332 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 2 300 IPR016266 GO:0003677(InterPro)|GO:0006261(InterPro)|GO:0006261(PANTHER)|GO:0008622(InterPro)|GO:0008622(PANTHER)|GO:0042276(PANTHER)
Cmu04g1310 332 Gene3D - 67 306 - -
Cmu04g1310 332 Pfam DNA polymerase alpha/epsilon subunit B 58 263 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1788 Cmu-Chr2:31767911 Cmu04g1310 Cmu-Chr4:27397056 3.60E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu04g1310 K02325 - csv:101207444 600.512