Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu05g0121 | ATGTGGATGGCCCCATGTGGTTGTGCTGGGGACACGTCACCCCAGGACCACGTACAACCGGCCCCTTCCTTTCCAGTGGGGACCACCCCGCAGGTACGTGTTCAGTTCTATTTTCCTGACACCTGCTTGGGTGGCGGAGATCCCCTCCTCCGCATCACCTTCTCCGTGGCACTTTCCTCACCGTTCGATCCTATTCGTTTCCTCTATTCCAATTATTTTCACAGTCATGACAGATATCCTTTGGACTCTAAATTAAACAATCCGGATGTTGATATTTCTAAAATAAAGAAGATGATAGATGCCACTGTTGCACTCATGAAGTGTTTTAGCGAGTTATCGGACACGTGTATGGTGACGTGGACGGTGCCTTGGCGCTCCCTTTCTCTTTCTCAATTCTCATTCCCCCGCCTCTCCTCTTCCTTCACCACTTTCATTCTCTATTTCTCTTTCTCTTTCTCTCTGCGAGAAAACGTTTTCCCCTTCTTTTCAAGAGTTTTTTTCCCAGAGATAATGCAGAGGATTCAAGCTGCGGTTTTCGCCATCGAATCAGTTGAGGTGTCCAGTTTGAGCTGTATCTGTAACATGGGAACTAGTGAAGAGGCGAAGTCTGTGAAGACTGAAAAACCATCCTCACCAACACCGGATCAGAATAGTGTGCCAAATTCAGCCAGTATTCATGTTTTTCCTGATTGGGCAGCCATGCAGGCATATTATGGTCCTAGAGTTGCAGTTCCACCATACTACAACTCTGCTGTAGCTTCAGGTCATGCTCCTCACCCTTATATGTGGGCTCCACCACAGATGATTCCTCCATATGGTACTCCTTATGCTGCAATCTATTCTCATGGAGGTGTTTATGCCCATCCTGCAGTTTCTATGGGACCACATTCACATGGCCCTGGTGTTCCCTCATCACCTGGGGCTGCACCTCCTTTGAGTATTGAAACACCTTCAAAGGTATCTGGAAATAGCAGTCAAGGTTTAATGAAGAAACTGAAAGGTTTCGATGGCCTGGCAATGTCCATAGGCAATGTTAGCACTGAGACTGCTGAAGGGGGAGCTGAGCATGGACAATCAGAGAGTATGGAAACTGAAGGTTCCAGTGATGGAAGTGATGGAACTACTGCTGGGGCAAATCAAACCAAAAGGAAACGAAGCCGGGAGGGAACACCTACCACTGGTAAGGATGCAAAAATTGAGCCACAGGCAAGTCCAGTTACTGCTGCTGAAATGAATGAAAGCTCTAGCAAATTATTGGGCACGACCAAAGCAGCTAATGCGACTGGAAAACTTGGATCTGTGATTTCTCCTGGAATGTCTACTGCATTGGAACTGAGAAATCCTTCCAGTATAAATGCCATGACAAGTCCAACGACGGTTCCACCTTGTTCAGTACTGCCTTCTGAAGTCTGGCTCCAGAATGAAAAGGAGCTAAAACGGGAAAGGAGAAAACAGTCGAATAGAGAATCCGCTAGGAGGTCAAGGTTGAGGAAGCAGGCTGAGACAGAGGAACTAGCTCGTAAAGTTGATTCGCTGACTGCCGAGAATGTTGCTATTCGATCTGAAATAAGTAGATTATCAGAGAACTCCGAGAAACTTAAGAAAGAAAACTCTACCTTGATGGAAAAGCTTAAAAGCGCTCAATCAGGACGAACAGAAGCATTAGACATGAATGAAAAGAGGATGCAACAACCTGTAAGCACAGAAACCAAAGGACCTGTGAATAAAAGCATTAACGAAGAGAGTATCATCTGCAAGAAAAACTCGAGTTCGGGTGCAAAACTGCGGCAGCTCTTGGATACGAGTCCGAGGGCGGATGCAGTCGCTGCTAGCTAA | 1836 | 46.46 | MWMAPCGCAGDTSPQDHVQPAPSFPVGTTPQVRVQFYFPDTCLGGGDPLLRITFSVALSSPFDPIRFLYSNYFHSHDRYPLDSKLNNPDVDISKIKKMIDATVALMKCFSELSDTCMVTWTVPWRSLSLSQFSFPRLSSSFTTFILYFSFSFSLRENVFPFFSRVFFPEIMQRIQAAVFAIESVEVSSLSCICNMGTSEEAKSVKTEKPSSPTPDQNSVPNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVASGHAPHPYMWAPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPGAAPPLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVSTETAEGGAEHGQSESMETEGSSDGSDGTTAGANQTKRKRSREGTPTTGKDAKIEPQASPVTAAEMNESSSKLLGTTKAANATGKLGSVISPGMSTALELRNPSSINAMTSPTTVPPCSVLPSEVWLQNEKELKRERRKQSNRESARRSRLRKQAETEELARKVDSLTAENVAIRSEISRLSENSEKLKKENSTLMEKLKSAQSGRTEALDMNEKRMQQPVSTETKGPVNKSINEESIICKKNSSSGAKLRQLLDTSPRADAVAAS | 611 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1101480 | 1110361 | + | CmPI595203_05g001210.1 | Cmu05g0121 | 415035 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 476 | 506 | - | - | |
Cmu05g0121 | 611 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 482 | 497 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu05g0121 | 611 | Pfam | Disordered region downstream of MFMR | 326 | 457 | - | - | |
Cmu05g0121 | 611 | Pfam | bZIP transcription factor | 475 | 537 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 525 | 575 | - | - | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 347 | 380 | - | - | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 295 | 328 | - | - | |
Cmu05g0121 | 611 | Pfam | G-box binding protein MFMR | 195 | 291 | IPR012900 | - | |
Cmu05g0121 | 611 | SUPERFAMILY | Leucine zipper domain | 478 | 534 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu05g0121 | 611 | Gene3D | - | 478 | 532 | - | - | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 407 | 435 | - | - | |
Cmu05g0121 | 611 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 477 | 540 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu05g0121 | 611 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 207 | 569 | IPR044827 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro) | |
Cmu05g0121 | 611 | CDD | bZIP_plant_GBF1 | 480 | 528 | IPR045314 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 202 | 221 | - | - | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 589 | 611 | - | - | |
Cmu05g0121 | 611 | SMART | brlzneu | 475 | 539 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 207 | 221 | - | - | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 561 | 575 | - | - | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 347 | 435 | - | - | |
Cmu05g0121 | 611 | MobiDBLite | consensus disorder prediction | 525 | 541 | - | - | |
Cmu05g0121 | 611 | Coils | Coil | 495 | 550 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu05g0121 | Cmu-Chr5:1101480 | Cmu10g0976 | Cmu-Chr10:1687103 | 5.90E-23 | dispersed | |
Cmu05g0121 | Cmu-Chr5:1101480 | Cmu09g1108 | Cmu-Chr9:11323078 | 2.30E-27 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
6079 | PF16596 | MFMR_assoc | 1.70E-21 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu05g0121 | K09060 | - | csv:101213720 | 733.406 |