Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0152 ATGCTTGTCAAACCTAGAAATGAACCACTTTTAAAAATTGAAATTATTCCCCGGAATCCTCCATTGCTGGGGTTTTCCGATGAGGTCAATGCCCTTAAAACCTCTGATTTGCTTTCCTTAGTTCCTCCTCTTTCCCTCTCTGAATCGATCGAAGAAGAAGAAATGTCAGTTTACGACGCTGCATTTGTGAACACGGAGCTCTCTAAACCCACCTCGATTTTCGGCCTTCGTCTCTGGGTTGTTATCGGAATCTTTGTCGGAGCTCTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTGACTTCTCGCAAGCGGAACCGCCATAAGAACCAAATCCGTTTTCCTAAGTCCACAACCCACCATTCTCCTCCTGCTGTTTCCAAAGAGATCCAGGAGATCGTCCACCACGCCGTGCCGGATCATCATCACCATGTTCAGCCGGAAATTCATGTCGAGATCGGGAAATTGGAGCATCGGGTTGTTTTCTCTGATAGACCTTCTAGTGGTGAGAGTAGAGGCACTGTGAGTGAAACTGCTTCTTTTGGATCTGGTACTGTTGGGCCTGAGGTTTCACACCTCGGTTGGGGCAGATGGTATACTCTCAGAGAGCTCGAGGCGGCCACTAATGGCTTGTGTGAAGAGAATGTGATTGGAGAAGGTGGATATGGGATCGTATATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAATCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTGGAAGTAGAAGCAATTGGACGCGTAAGACACAAGAATCTTGTCAGGTTGCTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTATGAGTACGTTAACAATGGCAATTTAGACCAATGGCTTCATGGCGATGTTGGGGATGTGAGCCCTTTGACGTGGGAGATTCGTGTTAACATCATACTTGGCACAGCAAAGGGATTAGCCTATCTTCATGAGGGTCTTGAACCAAAGGTTGTTCATCGTGATGTAAAATCAAGCAACATACTGCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGGCTGGCCAAGCTTCTTTGTTCTGAAAGAAGCTATGTGACAACTCGTGTAATGGGCACATTTGGCTATGTTGCACCTGAGTACGCCTGCACTGGAATGTTGAATGAAAAGAGTGATGTTTATAGCTTTGGAATTCTGATTATGGAGATAATTTCCGGGCGGAGCCCTGTTGATTACAGTAGACCTCAAGGAGAGGTAAATTTGGTGGATTGGTTGAAAGCAATGGTTGGTGACAGAAAATCTGAGGAAGTGGTCGACCCCAAGTTGCCGGAGAAGCCTCCTTCCAAAGCTCTCAAACGTGTTTTGCTGGTTGCTCTTCGTTGTGTCGATCCTGATGCTACAAAGAGGCCGAAAATGGGACACGTCATTCACATGCTCGAGGCAGATAATTTGCTGTCTCATGATGAACACCGGGTTGGTAAGGACTCTTCTCATTCAATTCAAGGCCATCAACATGAGAACCGGGCCGTTCCAAGACGAGTTAACAATCAGAAAGATGAACAGGCATCTTCTAATGTATGTGAAGGTGACAGTGATGGAAACATTCACCAACCAACTGTGCAGCGTCTGCTCAGCTTCCTTAAAATGCTAGCTGCTTTCTGTCCTGATATTGACTTAACAAAACCATTGTCTATAATTACCTTTCAGGCAAGTTTGGTAGAGACATCTCCAACTGTAACCTCTACTTCATGTGCTCTTTTGCTCTGTTCTGACTGGACCAGTAAGGCTAAGATGTGGACTAGAACTGAGGCATTCGCCTACGAAACCACGACGGGATTTTGTCTGATCTTCACGTTAGGCTGCCCGAAGTCTCATCCTAAGCTGGCTGTGGATGCTTCCAAAAGGATCAGATCAATCCTTTGGTTTATCTGCAACCATACATTGTCTTTTCGAGGACTCTCTGTCAAACTCAAAGCCTTTGGGAGTTTCTTCAAAACCCCCTTATCCAAAGCTTGCTTTTAG 2034 45.23 MLVKPRNEPLLKIEIIPRNPPLLGFSDEVNALKTSDLLSLVPPLSLSESIEEEEMSVYDAAFVNTELSKPTSIFGLRLWVVIGIFVGALIVLALFLLSLCLTSRKRNRHKNQIRFPKSTTHHSPPAVSKEIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGTVSETASFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLDQWLHGDVGDVSPLTWEIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVDWLKAMVGDRKSEEVVDPKLPEKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLSHDEHRVGKDSSHSIQGHQHENRAVPRRVNNQKDEQASSNVCEGDSDGNIHQPTVQRLLSFLKMLAAFCPDIDLTKPLSIITFQASLVETSPTVTSTSCALLLCSDWTSKAKMWTRTEAFAYETTTGFCLIFTLGCPKSHPKLAVDASKRIRSILWFICNHTLSFRGLSVKLKAFGSFFKTPLSKACF 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1349206 1352679 + CmPI595203_05g001520.1 Cmu05g0152 415066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0152 677 MobiDBLite consensus disorder prediction 494 535 - -
Cmu05g0152 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu05g0152 677 PANTHER OS01G0323000 PROTEIN 61 525 IPR052232 -
Cmu05g0152 677 ProSitePatterns Protein kinases ATP-binding region signature. 218 240 IPR017441 GO:0005524(InterPro)
Cmu05g0152 677 Gene3D Phosphorylase Kinase; domain 1 194 287 - -
Cmu05g0152 677 Pfam Protein tyrosine and serine/threonine kinase 215 482 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu05g0152 677 ProSiteProfiles Protein kinase domain profile. 212 489 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g0152 677 MobiDBLite consensus disorder prediction 168 184 - -
Cmu05g0152 677 SMART serkin_6 212 483 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g0152 677 FunFam Probable serine/threonine-protein kinase At1g01540 192 287 - -
Cmu05g0152 677 SUPERFAMILY Protein kinase-like (PK-like) 191 484 IPR011009 -
Cmu05g0152 677 MobiDBLite consensus disorder prediction 165 184 - -
Cmu05g0152 677 Gene3D Transferase(Phosphotransferase) domain 1 288 501 - -
Cmu05g0152 677 CDD STKc_IRAK 218 484 - -
Cmu05g0152 677 FunFam Putative receptor-like serine/threonine-protein kinase 288 498 - -
Cmu05g0152 677 MobiDBLite consensus disorder prediction 520 535 - -
Cmu05g0152 677 MobiDBLite consensus disorder prediction 494 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1642 Cmu-Chr1:30124713 Cmu05g0152 Cmu-Chr5:1349206 1.20E-167 dispersed
Cmu05g0152 Cmu-Chr5:1349206 Cmu08g1542 Cmu-Chr8:27273886 6.00E-170 dispersed
Cmu11g0570 Cmu-Chr11:6280047 Cmu05g0152 Cmu-Chr5:1349206 6.80E-50 dispersed
Cmu02g0539 Cmu-Chr2:5082001 Cmu05g0152 Cmu-Chr5:1349206 2.40E-141 transposed
Cmu05g0152 Cmu-Chr5:1349206 Cmu05g0943 Cmu-Chr5:8615648 2.60E-72 wgd
Cmu05g0152 Cmu-Chr5:1349206 Cmu07g0805 Cmu-Chr7:20537696 1.70E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75496 PF07714 PK_Tyr_Ser-Thr 2.90E-45 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0152 - - - 0.0