Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0157 ATGGCTCATCCACCGCTGGATGGATCATCTCGCGGCAATGGAATGAACGTATCCGACGGCAGGAACTCGTCTGAGGAGCTTTTAGGAGCTACATTTTCACTTCAATCGGATTCGTCCATAACAGATTTAGTATCTCAATTGATAAATCTTGTTCCTGTCTGGTTCTTACGGAGTTTACTGGACCCTTACACAAAGATTTCCGAATACGTTGACCGGGTTCTTAGAACGAGTGTTATTCTAAATAAAAGATACTATAAAGATGAATCTCACAGTTTGAAGAGCGCCTCTGCATGGCGTTTACATATCCCTAGTTATGGTACACGTCGCATTGGTACATTTGTGCCCGCATCGTCGTTGAAATACTGGAACACTATCCCTCTTACTTCTCTTGGAAATCTATCAAATTCTCGATTTTATTCATCGGCTTCGGGTAGGAAAGTTGATATAACTGGAGATACTGGTGTTCCAGCAGCTTCTGCGGGTGTTGAACCGGATATCAGTAACCCCCCTGATCTTGGAAAGGACTTGCTTGAAAGGGTTAAGGATGTTTGGCAGAGTGCCGTAGATGCAACATCTTATACCGGGCAGAAGGCTAAAGAAGTATCGGATGAATTATCTCCGCATGTAGATAAACTCTTCAATTCACATCCATATCTAAAAAATGTGATTGTTCCTGTAAGTATGACCTTGACTGCTACTCTTTTGGCTTGGGTGGTAATGCCCAGGCTTTTGAGGAGATTTCATAAGTATTCAATGCGAAGTCCTGTTGCCATACTATCTGGAAGCATACCCAGTGAGGAAATTCCATATGAGAAAAGTTTTTGGGGTGCACTTGAGGATCCTTTGCGATATCTTGTTACCTTCTTTGCTTTTTCTCAAATTGGCATGATGGTTGCACCAACTGCAGTAGCACCAGAGTTTGTTTCACAGGCATGCAGGGGGGGTGTAATCCTTTCCCTTGTCTGGTTTATTTATCGCTGGAAAACAAATGTGTTATCTCGAGCCTTGGCCACCCAGACTTTTGCAGGGCTTGATCGGGACAGGTTACTTACCATTGATAAAGTTTCATCTGTTGCTTTATTTGCTATTGGATTAATGGCTTTGGCCGAGGCATCTGGTGTGGCCGTTCAATCTATGTTGACAGTTGGTGGTATTGGAGGAGTGGCCACTGCTTTTGCTGCGAGGGACATTCTTGGTAATATTTTGAGTGGCTTAACAATGCAGTTTTCACAACCCTTCTCACTTGGAGATACAATTAAGGCTGGTGCTATTGAAGGTCAAGTTGTGGAAATGGGACTCATGACAACATCACTTTTAAGTGCTGAAAAATTTCCAATCGTTGTTCCAAATTCTCTGTTTTCTAGCCAGGTCATTATAAATAAGTCGCGGGCACAGTGGCGAGCAATCACAAAGAAAATTCCTTTGCATGTTGATGATTTCAGTACAGTTTCTCAGATATCAGATGGTATTAAGAATATGCTTATGTCTCACCCTAAGGTGTTCTTGGGCAAAGAGGCTCCTTATTGTTTTCTCTCTCAAATTGAAAGTACATATGCAGAATTGACATTCGGTTGTAACCTTAAGAAAATGGGTAAAGAAGAATTGTTCTCTACAGAGCAAGATATCCTCCTTCAGTCAGTACAGATCATTAAGGAGAATGGTGCAAGCTTAGGTAGCACCATGTCAGATTGGACGAACAATTCTGCAGCAATTCTCAATGCGATTGGGAGAGCCATGAAGAAAGCAACTCATCCATAA 1758 42.21 MAHPPLDGSSRGNGMNVSDGRNSSEELLGATFSLQSDSSITDLVSQLINLVPVWFLRSLLDPYTKISEYVDRVLRTSVILNKRYYKDESHSLKSASAWRLHIPSYGTRRIGTFVPASSLKYWNTIPLTSLGNLSNSRFYSSASGRKVDITGDTGVPAASAGVEPDISNPPDLGKDLLERVKDVWQSAVDATSYTGQKAKEVSDELSPHVDKLFNSHPYLKNVIVPVSMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSIPSEEIPYEKSFWGALEDPLRYLVTFFAFSQIGMMVAPTAVAPEFVSQACRGGVILSLVWFIYRWKTNVLSRALATQTFAGLDRDRLLTIDKVSSVALFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNILSGLTMQFSQPFSLGDTIKAGAIEGQVVEMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIPLHVDDFSTVSQISDGIKNMLMSHPKVFLGKEAPYCFLSQIESTYAELTFGCNLKKMGKEELFSTEQDILLQSVQIIKENGASLGSTMSDWTNNSAAILNAIGRAMKKATHP 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1373321 1377096 - CmPI595203_05g001570.1 Cmu05g0157 415071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0157 585 Gene3D - 310 410 - -
Cmu05g0157 585 MobiDBLite consensus disorder prediction 1 22 - -
Cmu05g0157 585 SUPERFAMILY Sm-like ribonucleoproteins 396 461 IPR010920 -
Cmu05g0157 585 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 315 395 IPR011014 GO:0016020(InterPro)
Cmu05g0157 585 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 194 566 - -
Cmu05g0157 585 Gene3D - 412 460 IPR023408 -
Cmu05g0157 585 Pfam Mechanosensitive ion channel, beta-domain 396 463 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0157 K22047 - csv:101220483 897.501