Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0160 ATGGCATCAAGTTTGGGAGGGGCATCGATGTCACAAACAGATGATTTCGAGACGTTCACTCCAACGACTGATGTTGAGCCGCTAAAGAGGGCCTGGTGTAATGAGAAGGCTGCTCCTGAGATTCTACCCTTTGAGGGATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAGTCAATGGAAGAGACTATAGAGGAATATTCAAGAAGTGGTATCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTGTTGAGATCGTATGTTAGGAGTCGTTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCCAAAGAAGAGATAACGTTTACTGATAGGTGTCGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCTGAACCTCCACTGGACACATTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACATATCCAGCTTGAGGATGAGGAAGAGAGGGCATCCAGTAGAATAGAGGAACCTTTTGAGATGGAGGCCAATCTTTCGACATGGGTGATGGAGACTATTTCAGTGGCTGCTTGGATGCTAATTTCAACATTGGATGAGCTCATAAATGAAAGGAATGATAGAGCATTGAAGGCTGGTGAGCCATTTCAATCTGATATTTCATGA 753 40.9 MASSLGGASMSQTDDFETFTPTTDVEPLKRAWCNEKAAPEILPFEGSLVGRIKEQIQSMEETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYVRSRLQKIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANLSTWVMETISVAAWMLISTLDELINERNDRALKAGEPFQSDIS 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1392377 1395660 - CmPI595203_05g001600.1 Cmu05g0160 415074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0160 250 MobiDBLite consensus disorder prediction 1 21 - -
Cmu05g0160 250 CDD GINS_A_Sld5 24 142 IPR038749 -
Cmu05g0160 250 MobiDBLite consensus disorder prediction 1 20 - -
Cmu05g0160 250 PANTHER SLD5 PROTEIN 11 213 IPR008591 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro)
Cmu05g0160 250 FunFam DNA replication complex GINS protein SLD5 9 212 - -
Cmu05g0160 250 SUPERFAMILY GINS helical bundle-like 20 154 IPR036224 -
Cmu05g0160 250 Gene3D - 10 216 - -
Cmu05g0160 250 Pfam GINS complex protein helical bundle domain 75 138 IPR021151 -
Cmu05g0160 250 Coils Coil 49 69 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0160 K10735 - csv:101210888 387.882