Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0268 ATGCTCTCTTCACATTTCCTACCTTCGAAAAACCCTATTTCCACCAACCCCACTTCCCCTTTTTCCCTATTTTACCCAAATCTCCTCCCAACCGTCCGATCGAAATCTACCAATCGCCCACAAATCTCTGCCTTCTCCACCATTAATGGCGTCTCTTCAAAACCCACGTCTCAGATTCTCAATCCAATCCCCAAATCGAGCAGATTCTGCAAAAATCCAGTGAACCCATTTCGGTTTCTTCCGTGCAAACCTAAACCCTTTGTCCCCGCCGCCGCTGCCGCAGACGGCGGCGATACCACCGCTGATTCCGCCTCCAATGGTAAAACCTTTCAGCTCGCCATCGTCTTTGGGCTCTGGTATTTTCAGAACATCGTCTTCAATATCTACAACAAGAAGGTTCTCAACATTTTCCCTTTCCCATGGCTTCTCGCTTCGTTTCAACTCTTCGCTGGATCGGTTTGGATGCTCGTTCTCTGGTCCTTTAAGCTTCAGCCATGCCCTAAAATCTCAAAGCCCTTTCTAATCGCTCTCCTCGGTCCCGCTTTGTTTCACACAATCGGCCATATCTCTGCCTGCGTTTCGTTCTCAAAAGTCGCCGTTTCTTTCACTCATGTCATTAAATCGGCGGAACCGGTCTTCTCGGTTCTTTTCTCCTCGTTCCTCGGCGATTCGTATCCAATCCAGGTCTGGCTTTCGATTCTCCCCATTGTTTTTGGCTGCTCTTTGGCCGCCATTACTGAAGCTACCTTCAATTTTGAAGGTCTATCAGGCGCCATGATTAGCAATGTAGGGTTTGTGTTAAGAAACATTTACTCCAAAAGGAGCTTGCAGAACTTCAAGGAGGTTAATGGGTTGAATTTATATGGTTGGATTAGTATAATTTCTTTGTTGTATCTGTTTCCTGTGGCCATTTTCGTCGAAGGGTCAAAATGGGTTCAAGGATATCATCAAGCAATTGCTTCCATTGGAAATGCTTCAACATTATATATCTGGGTTTTGATTTCTGGCATATTTTATCATCTTTATAATCAATCTTCGTACCAAGCTTTGGATGAGATCAGTCCTTTGACATTCTCTGTTGGGAATACAATGAAGAGAGTGGTTGTGATTGTGGCTTCTGTTTTGGTTTTTAGAAATCCAGTTAGGCCTTTAAATGCTGTTGGTTCTGCCATTGCCATTTTTGGGACTTTTCTGTATTCTCAGACAACAACTAAAAAGAGTACTAAGAAGATTGAGGAAGGTGAAAAGAAGGAATGA 1257 43.99 MLSSHFLPSKNPISTNPTSPFSLFYPNLLPTVRSKSTNRPQISAFSTINGVSSKPTSQILNPIPKSSRFCKNPVNPFRFLPCKPKPFVPAAAAADGGDTTADSASNGKTFQLAIVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFAGSVWMLVLWSFKLQPCPKISKPFLIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVLFSSFLGDSYPIQVWLSILPIVFGCSLAAITEATFNFEGLSGAMISNVGFVLRNIYSKRSLQNFKEVNGLNLYGWISIISLLYLFPVAIFVEGSKWVQGYHQAIASIGNASTLYIWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVASVLVFRNPVRPLNAVGSAIAIFGTFLYSQTTTKKSTKKIEEGEKKE 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2302370 2303626 - CmPI595203_05g002680.1 Cmu05g0268 415182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0268 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 401 - -
Cmu05g0268 418 Pfam Triose-phosphate Transporter family 111 400 IPR004853 -
Cmu05g0268 418 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 111 410 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu05g0268 418 PANTHER SOLUTE CARRIER FAMILY 35 108 402 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1275 Cmu-Chr1:25362415 Cmu05g0268 Cmu-Chr5:2302370 1.50E-62 dispersed
Cmu05g0268 Cmu-Chr5:2302370 Cmu05g1512 Cmu-Chr5:23003661 5.70E-86 dispersed
Cmu05g0268 Cmu-Chr5:2302370 Cmu01g2155 Cmu-Chr1:34178698 1.50E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0268 K15283 - csv:101219051 715.301