Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0319 ATGTCTTTCAATCAATCAAGGCATGATAAGAATGAGGATCCTCAGTTTAAGAAATCTGGCCGATCGTCGAGCTCCAATCAACAGAAAATCTCTTGTGAACTTCATTCTAAGCCGGGCGATTCCGGCAGGTATGCGCCGCCGATCATCTCCAACCATAGTGTTAAGCAGTCTAACGATGCGCAACAAGCACGGAAAACTAGGGCTGGTGTATCCTCTGTAAGTTCTACCGTTTCTACTACCCCTCGGGAAGGGCAAAACGGTTCTCATGTGCAGCCGCAACAGAATGGTTCAGCATCCAATCCAGTAACATTGTCAGGATCCGAAAGCGGGGTTGTTAAAAAAAATGCAACTTCTCGAACGGCCTCCAAGACTTTTGATGCATTTTTAGAATCCAAGAGCGGAATTGTTCAAAATAATGCAACTTCTAAGCCTACCTCAAAAACTTTCGGCACTACCTCCTTTAAAGACCTGGGGGAACAGCATATGACATTTCCACTTCAATTTGGATCCTTAAGTCCTGGTTTCCAGATTCCTAGGACCAGCTCAGCTCCTTCGAATCTGCAAGAACAGATATTGAACCAGGCACCACGCCATGTGTTTAAATCTGTACCTTCAGGGTCAGTGCAGCCAGTACCCAGACAACCAATAGCAAACAATGATTCCAGTGTCTGTGATCAACCAAATATTGGAACATCCAATCCAGAGCCAGAGACCAAAAAGGAGATGCAAGTCTCGTCAGGAGCACCGGTAAGCCAGATTCAGAAGCCTTCCCATGTATCATTTGTTAGTCACAGAGCTTCTATTTCCCTCCCTGACAGTAAGAGTATGAGCCTTGTGCATCATGTTGCTAATTCACCTAATGTGAAAGAAGTCCAAGTTCACGATGAGAACTCTACTTCCTCAGCAGCAAAGCATGTGGCAATGCAGTCTCTTCCTGGGTCTTTGACGCAGGTCATCTACTCATGTCCTAAAGAAAGCCTATCTAAGTCCAACTCAATTGAGGCCGATAACAAAGTATCCGGCAAGAAAGGACCGATTCAACTGCTGCATCAGGTTGAGGTTCCAGATCCCATTTTTTATACTAAGCTGGAATCCTCTTTGCAATTCGAGCAATCAAAGCATGAGCTCGTTGGAACAGAAAAGGTAGGAGCAAGAAGATCGCCTGATTCTCAAGATAACATAGAACAAAGTAAACCACCATCTTGTATGAAGCCAACTGCAATTAATAACGGCAATTCAACGTCAAAAACACTGAAAGAAGTTGGCAGTACAAACGACAATAATGTTCTTTCTAACTCCATAACTCATGGTTGTAAGACTTCACCTATTATTATATCTTCTTGTCAAAGCGATAGTAACACTATCGATGATACTGTAGTTTGCCAAGCTGATCTGCAATCTCCTCTTGTTGAAACGTCTGACCTCTCAGAGATGAAGCAGGAAGGAGATAGAATAGAGCACACAGGTGGTCAATGTGACCCTAATTTTAGACCCTTTATTGAAGATAAATCTGTCATAGACATAAATAAGATGAGGAATAGGTCGAAGAAGAAGAGGAAGGAAATTCTTCGGAAGGCAGATGCTGCTGGGACTACTTCTGACCTTTATATGGCATATAAAGAACCTGAAGAGAAGAAAGAGACTACTATCTCTGCAGAAAGCTCCAATGAGAGCATAAATATGAAACACGAGTCTGCTGGTTCCTTTAAGGAAGAGGCTGCCTTGACCAAGAAGGATGTTCAGGGTAAACTCGAGCCAGATGATTGGGAAGATTCAGTTGATAATTCTACTGATACATTGAAATACGAGGGTGGTTTTGAGGATAAGGCCAACGGAAAAGTTGCATTGCACCTGGAGGATGGGAGTAGAGATCTGGCCAAAAAGTACTCCAGAGATTTCCTCCTGAAATTCGCCGAGCAGTTCATGGACCTTCCCGATGGGTTTGAAGTTTCTCCCAACATGAAGGCTTTAATGAGTAACCATGGCTCTCGTTCTGTCAATAGTAACTCACCTGCTAATCATGAAAAAATGGATAAGCCAAGTGGAGGGTCTCGACTTGATCATCGTGCTATTACTGTGGATGACAGACTATTTGCTTCAGGGCGGCATTCGCACTTGGATAGCACTCGACCTACTCAAGGTGCTAACAATAGTGCTGTAAAGACCCCTTGGGCGCACACCGGTTCACAGGGAAAGATCCAAAGAAATGGCTCCAATACTGATAGGTGGCAAAGAGATGCTAGTTTTCAGCTGAAAGGTATAATTTCTCCTTCAACTCCATCACAGGTGATGCACAGAGCCGAGAAGAAATATGAAGTGGGTAAAGTGGCTGACCAGGAAGAGACCAAACAAAGGCAGCTGAAGGCTATACTAAACAAGCTAACTCCACAAAATTTTGAAAAACTCTTTGAACAAGTGAAAGCAGTTAATATTGATAGTTCGAAGACACTAAGTGGTGTCATCTCTCAGATATTTGACAAAGCTCTGATGGAGCCTACTTTCTGTGAAATGTATGCCAATTTTTGTCTCCATCTGGCTGGCGAGTTACCTGATTTTAGCGATGATAATCAGAAGATTACTTTTAAGAGGTTGCTTTTAAACAAATGCCAAGAGGAATTTGAGAAAGAGCAGGAAGAAAATGATGAAGTTAATAAGGTCGGTGAGATGAAACAGTCTGCAGAGGAACGAGAAGTGAATAGAATAAAGGCGCGCAGAAGAATGCTTGGCAACATTAGGTTAATTGGGGAGCTTTACAAGAAAAAGATGATAACAGAGAAAATTATGCATGTATGCATCAAGAAATTGTTAGGTCCGTACCAAAATCCGGATGAGGAAGATATTGAAGCATTATGCAAATTGATGACCACTATAGGAGAGATGATAGATCACCCCAAAGCTAAGGAGCATATGAATGCATATTTTGAGATGATGACTAAATTATCTAATAACATGAAGCTGTCATCTAGAGTTAGATTCATGTTGAAGGATGCAATTGATTTGAGAAAGAATAAATGGCAACAGAGGAGAAAAATTGAAGGACCTAAAAAAATTGATGAAGTGCACAGGGATGCTGTGCAAGAACGTCAAGCGCAAGCTAGTAGATTAAGCCGTGGTCCTGGAATCAGTGCACCATTGAGGAGGGGAACATCCATGGATTTTGGTTCAAAAGCGCCTGCATTATTGCCTTCTCCCAATGCCCAGATTGGTGGTTTTCACGGTTTTTCAACCCAGAATTGTGGTTCAAGCAGTCAAGACGCTCGTTTTGAAGGTAAACTACGGTCTCCTGAGGCCAAGGCATTCCCAACTCCGTTGCCCCAAAGACCTATCAGTGATGATGCTATCACTTTAGGTCCCCAGGGTAGTTTAGCTAGAGGAATGTCCATTAGAGGGTCAAGATCCATTTCATCCAATTCATTAGTAGATTTGTCCTTGCCGACTGGTAATAACTGCCAAAGAATGGTAGCTGCTTTAAATCCTCATGGCCTTGTATCAGAGCATGCAATTTCCAACTCCAGAGGGGACATCCCTTCAAGAAAATTTTCAAAGGGAACTCTAGGTTCAGAATCCTTCGATCAGGCGACGAGTACACTGGAACCTGGTATTAGTTTTGGATCTAGGCAAAGGGGAAACGTTGATAGCGGTCTTGGGAGGTCTCAGCCGACCAAATATGAACAACCAGCTTTGACTACGAATGGCCATTCTGAGGTTACGTCCAAAGAACATCTACGAGATAAGTCCATAGCAGCTATTAGGGAATATTACAGTGCTAGAGATGAGAAGGAAGTTACCCTGTGCATCAAGGACTTGAATTCGCCTGAATTCCATTCATCCATGATTTCTCTTTGGGTCACAGACTCCTTTGAGAGAGAAAACACAGAAAGGGATCTTTTAGCTAAACTTCTTGTTAGCCTCACCAAATCAAAGGATGATACATTGACTCAACTCCAACTTCTCAAAGGAATCCAGCTCGTTGTCGCCACACTGGAGGATGCTGTGAATGATGCCCCAAAAGCTCCAGAATTTATGGGCCAATTACTCGCTAACTTGGTGGTGGAAAACTTGATTTCATTGAAAGAAATCGGGAAGTTTATATATGAAGGTGGAGAGGAGGCTGGGAAGCTTCTACAAGTTGGGCTTGCAGCTGATGTTCTTGGCAACGTGCTGGAAGTAGTTCAATTGGAGAAAGGTCAGATTTTCTTGAACGAAATTCTTAAATGTTCTGATCTACAATTAGAAACATTTCGCCCTTCATACCCAATCAAATCGACAAAGTTAGAGAAATTTATTTAG 4290 42.66 MSFNQSRHDKNEDPQFKKSGRSSSSNQQKISCELHSKPGDSGRYAPPIISNHSVKQSNDAQQARKTRAGVSSVSSTVSTTPREGQNGSHVQPQQNGSASNPVTLSGSESGVVKKNATSRTASKTFDAFLESKSGIVQNNATSKPTSKTFGTTSFKDLGEQHMTFPLQFGSLSPGFQIPRTSSAPSNLQEQILNQAPRHVFKSVPSGSVQPVPRQPIANNDSSVCDQPNIGTSNPEPETKKEMQVSSGAPVSQIQKPSHVSFVSHRASISLPDSKSMSLVHHVANSPNVKEVQVHDENSTSSAAKHVAMQSLPGSLTQVIYSCPKESLSKSNSIEADNKVSGKKGPIQLLHQVEVPDPIFYTKLESSLQFEQSKHELVGTEKVGARRSPDSQDNIEQSKPPSCMKPTAINNGNSTSKTLKEVGSTNDNNVLSNSITHGCKTSPIIISSCQSDSNTIDDTVVCQADLQSPLVETSDLSEMKQEGDRIEHTGGQCDPNFRPFIEDKSVIDINKMRNRSKKKRKEILRKADAAGTTSDLYMAYKEPEEKKETTISAESSNESINMKHESAGSFKEEAALTKKDVQGKLEPDDWEDSVDNSTDTLKYEGGFEDKANGKVALHLEDGSRDLAKKYSRDFLLKFAEQFMDLPDGFEVSPNMKALMSNHGSRSVNSNSPANHEKMDKPSGGSRLDHRAITVDDRLFASGRHSHLDSTRPTQGANNSAVKTPWAHTGSQGKIQRNGSNTDRWQRDASFQLKGIISPSTPSQVMHRAEKKYEVGKVADQEETKQRQLKAILNKLTPQNFEKLFEQVKAVNIDSSKTLSGVISQIFDKALMEPTFCEMYANFCLHLAGELPDFSDDNQKITFKRLLLNKCQEEFEKEQEENDEVNKVGEMKQSAEEREVNRIKARRRMLGNIRLIGELYKKKMITEKIMHVCIKKLLGPYQNPDEEDIEALCKLMTTIGEMIDHPKAKEHMNAYFEMMTKLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKIEGPKKIDEVHRDAVQERQAQASRLSRGPGISAPLRRGTSMDFGSKAPALLPSPNAQIGGFHGFSTQNCGSSSQDARFEGKLRSPEAKAFPTPLPQRPISDDAITLGPQGSLARGMSIRGSRSISSNSLVDLSLPTGNNCQRMVAALNPHGLVSEHAISNSRGDIPSRKFSKGTLGSESFDQATSTLEPGISFGSRQRGNVDSGLGRSQPTKYEQPALTTNGHSEVTSKEHLRDKSIAAIREYYSARDEKEVTLCIKDLNSPEFHSSMISLWVTDSFERENTERDLLAKLLVSLTKSKDDTLTQLQLLKGIQLVVATLEDAVNDAPKAPEFMGQLLANLVVENLISLKEIGKFIYEGGEEAGKLLQVGLAADVLGNVLEVVQLEKGQIFLNEILKCSDLQLETFRPSYPIKSTKLEKFI 1429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2730442 2736748 + CmPI595203_05g003190.1 Cmu05g0319 415233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 393 424 - -
Cmu05g0319 1429 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 233 1418 IPR045208 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER)
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 1183 1235 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 203 241 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 659 675 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 18 34 - -
Cmu05g0319 1429 SUPERFAMILY ARM repeat 1238 1419 IPR016024 -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 1027 1046 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 705 741 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 207 241 - -
Cmu05g0319 1429 ProSiteProfiles MI domain profile. 1241 1365 IPR003891 -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 1 118 - -
Cmu05g0319 1429 SMART ma3_7 1242 1356 IPR003891 -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 1183 1239 - -
Cmu05g0319 1429 Pfam MA3 domain 1243 1355 IPR003891 -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 877 897 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 659 687 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 378 392 - -
Cmu05g0319 1429 FunFam Eukaryotic translation initiation factor 4G 784 1017 - -
Cmu05g0319 1429 Pfam MIF4G domain 785 1004 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cmu05g0319 1429 SUPERFAMILY ARM repeat 778 1006 IPR016024 -
Cmu05g0319 1429 FunFam Eukaryotic translation initiation factor 4G 1235 1428 - -
Cmu05g0319 1429 SMART if4_15 784 1004 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cmu05g0319 1429 Coils Coil 866 886 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 50 118 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 1 17 - -
Cmu05g0319 1429 Gene3D - 1233 1429 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 703 741 - -
Cmu05g0319 1429 Gene3D - 784 1017 - -
Cmu05g0319 1429 MobiDBLite consensus disorder prediction 378 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0319 Cmu-Chr5:2730442 Cmu06g1308 Cmu-Chr6:24228078 4.00E-54 dispersed
Cmu05g0319 Cmu-Chr5:2730442 Cmu06g0833 Cmu-Chr6:10611888 2.20E-270 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0319 K03260 - csv:101222372 2218.35