Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu05g0357 | ATGCTCTCTGGGTTTTCACAGGAACCGGCCGGAATGTACTCGGCCATTCCGGCGCTGCCGATGGACAGCGGCGGCGGTAAGTTTCAGGGTTCTTTAGATGGAACGAATCTTCCCGGCGACGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGCTGGACGGCGGAGCTCCATGAACGATTCGTTGACGCCGTCACTCAGCTCGGCGGCCCCGACAAGGCAACGCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGTCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATATCGGCTCGGGAAGCAATCGTTCAAGGAATCAACCGAGAACTCAAAGGATGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCCTCGTCGTCGCCATCGTCGAGAATAATGACACAGGATCTGAATGATGGTTTCCAAGTCACGGAGGCTTTACGAGTGCAAATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTGGAGGTTAATCTCTCATTTGTTCTTCTCGAACAAACCCGAATCTGTTGCGATAAATCTGAGAAAACTCACTGTTTTCCATTTTCTACTCCCTGCTTTTACTGTAAGCAGGTGCAGCGTCATCTTCAACTTCGCATTGAAGCACAAGGCAAATACTTGCAGTCGATACTCGAGCGGGCTTGTCAAGCATTGAGTGATCAGGCTGCAGCGTCCGCCGGACTCGAAGCTGCCAGAGAAGAGCTCTCTGAACTTGCAATCAAAGTCTCCAATGATTCTAAAGAGATGGCACCATTGGAGACTCAAAAAGTGCTTCCCTTTTCAGAACTTGCTGCTGCTCTAGAAAATCGAAAGGCTCCTACTGTTATGCCTCGAATAGGCGATTGCTCGATGGATAGCTGCCTGACATCAGCTGGTAGCCCAGTTTCCCCAATCAGAGTAGGATCAACTGCCACTGCAATGAAGAGACCGAGACCAGTTTTTAGTCATGGAGATTCAATGACTCTCGAGGGCAATGCCCGACACGATGTTGAATGGATGATGAGTAATATTGGATGA | 1053 | 49.29 | MLSGFSQEPAGMYSAIPALPMDSGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETSSSSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVNLSFVLLEQTRICCDKSEKTHCFPFSTPCFYCKQVQRHLQLRIEAQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFSELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIRVGSTATAMKRPRPVFSHGDSMTLEGNARHDVEWMMSNIG | 350 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3032904 | 3036646 | - | CmPI595203_05g003570.1 | Cmu05g0357 | 415271 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu05g0357 | 350 | Gene3D | - | 49 | 107 | - | - | |
Cmu05g0357 | 350 | Pfam | Myb-like DNA-binding domain | 52 | 103 | IPR001005 | - | |
Cmu05g0357 | 350 | MobiDBLite | consensus disorder prediction | 115 | 139 | - | - | |
Cmu05g0357 | 350 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 50 | 105 | IPR006447 | GO:0003677(InterPro) | |
Cmu05g0357 | 350 | FunFam | Myb family transcription factor | 49 | 107 | - | - | |
Cmu05g0357 | 350 | Pfam | MYB-CC type transfactor, LHEQLE motif | 148 | 169 | IPR025756 | - | |
Cmu05g0357 | 350 | Pfam | MYB-CC type transfactor, LHEQLE motif | 204 | 228 | IPR025756 | - | |
Cmu05g0357 | 350 | Coils | Coil | 240 | 260 | - | - | |
Cmu05g0357 | 350 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 28 | 314 | IPR046955 | GO:0003700(InterPro) | |
Cmu05g0357 | 350 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 47 | 107 | IPR017930 | - | |
Cmu05g0357 | 350 | SUPERFAMILY | Homeodomain-like | 50 | 107 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g2051 | Cmu-Chr1:33535550 | Cmu05g0357 | Cmu-Chr5:3032904 | 3.80E-42 | dispersed | |
Cmu02g1871 | Cmu-Chr2:32636481 | Cmu05g0357 | Cmu-Chr5:3032904 | 2.20E-41 | dispersed | |
Cmu05g0357 | Cmu-Chr5:3032904 | Cmu07g0272 | Cmu-Chr7:2695056 | 2.70E-36 | dispersed | |
Cmu05g0357 | Cmu-Chr5:3032904 | Cmu09g2179 | Cmu-Chr9:37863001 | 1.20E-41 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
6099 | PF00249 | Myb_DNA-binding | 2.20E-07 | CL0123 | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu05g0357 | - | - | - | 0.0 |