Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0363 ATGGGTAGCGGAGAAAAGGTTTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTATATGATGTGACCAAGTTCTTAGAGGACCATCCTGGTGGTGACGATGTTTTGTTATCAGCTACAGGAAAAGATGCAACCGACGACTTTGAAGACGTGGGCCACAGTGACAATGCAAGAGAGATGATGGATCAATACTATGTTGGGGAGATTGATGCTTCAACAATTCCAAAGAAGGTTGCCTACACACCTCCAAAGCAGCCTCATTACAATCAGGACAAGACATCCGAGTTCATCATCAAGCTTCTCCAATTCCTCGTCCCGCTTGCAATTTTGGGATTGGCAGTTGCCATACGCTTCTACACCAAACAAGCTTGA 405 45.93 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3084850 3087215 + CmPI595203_05g003630.1 Cmu05g0363 415277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0363 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cmu05g0363 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cmu05g0363 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cmu05g0363 134 FunFam Cytochrome b5 type B 3 85 - -
Cmu05g0363 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cmu05g0363 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Cmu05g0363 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cmu05g0363 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cmu05g0363 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cmu05g0363 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cmu05g0363 134 PANTHER CYTOCHROME B5 5 131 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cmu05g0363 134 Gene3D - 2 86 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0022 Cmu-Chr1:180797 Cmu05g0363 Cmu-Chr5:3084850 2.20E-47 dispersed
Cmu05g0058 Cmu-Chr5:650536 Cmu05g0363 Cmu-Chr5:3084850 1.00E-34 dispersed
Cmu05g0363 Cmu-Chr5:3084850 Cmu11g0205 Cmu-Chr11:2508603 8.40E-15 dispersed
Cmu06g0275 Cmu-Chr6:3151632 Cmu05g0363 Cmu-Chr5:3084850 4.10E-30 transposed
Cmu06g0328 Cmu-Chr6:3836420 Cmu05g0363 Cmu-Chr5:3084850 2.30E-09 transposed
Cmu08g0990 Cmu-Chr8:22137338 Cmu05g0363 Cmu-Chr5:3084850 1.60E-27 transposed
Cmu05g0363 Cmu-Chr5:3084850 Cmu06g0773 Cmu-Chr6:9444374 8.00E-58 wgd
Cmu05g0363 Cmu-Chr5:3084850 Cmu07g0244 Cmu-Chr7:2439450 4.70E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0363 K23490 - csv:101214209 275.404