Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0461 ATGGAAAAGCTTATTAGTGGCGGCAAAGAAGGCGAGAAAAAGAGGGACAAAAATGGAATATTCGGAGCTAAGCGCGACTCAGATTCCAAGCACGTGAGTTGGAGGGTGTTGCCGCTTCTTAAATATCCCATCATCCCCTCCTCATTTCTCTCCATCGCCGCTCCTTCTTCCTCCTCCTCCTCCATTTTCCGGCGCAGTGAAGATCGCGGTCATTCAGTGCTTACTCTCATTCGGTCCACGCTTCTTAGGGGAAGAATTTTGAGAAGAGAAAACGCATATGATCTATTTTGTGTATCTCTTGTTACCAAACTATTGGGTCGAATTTACTATCACAAAGAAGGCTCAGACAAGCCTGGTGAATTGCCTTCAAACATAGCCGCCGCTATAAACGGCGTCGCTTTCTGTGGAACCCTCTCTGGCCAACTCTTCTTTGGGTGGCTTGGTGACAAGATGGGCCGGAAACGAGTCTACGGAATGACCCTTATGCTTATGGTCATTTGCTCTGTAGCTTCCGGACTATCTTTCAGCAGCACCCCAACATCTGTGGTGGCCACTCTCTGTTTTTTCCGATTCTGGCTTGGATTTGGCATCGGCGGCGATTACCCACTTTCCGCCACCATCATGTCGGAGTATGCCAATAAAAGGACACGAGGGGCGTTCATTGCCGCTGTCTTTGCAATGCAAGGGTTTGGGATTTTGGCCGGTGGGGTGGTGGCAATAATTGTCTCTGCCGCATTTGACGCCAAATTCCCATCTCCATCGTATAAGGACAATCCCACCGCCTCAACCGTCCCACAAGCTGATTATGTGTGGCGAATTATTGTGATTTTTGGTGCCTTTCCGGCTCTACTCACTTATTACTGGCGAATGAAAATGCCTGAAACTGCTCGTTACACCGCCTTGGTTGCTAAAAATGCCAAACAAGCAGCCGCTGATATGTCTAAAGTTCTACAAGTTGAATTGGAATCAGAGCAGGAAAAAATCGACGAGGGAAAATCGAAGAATAATGACTTTGGGTTGTTCTCAATGAGTTTTGTTCGTCGGCATGGGCTTCACTTGCTAGGGACTACTACTACATGGTTCTTGTTAGACATTGCATTTTACAGTCAGAATCTATTCCAGAAGGACATTTTCACTGCCATTGGTTGGCTTCCTCCACCAGAGACGATGAACGCCATTGAAGAAGTTTTCAGAATCGCCAAAGCTCAAACCCTCATTGCATTGTGCAGTACAGTACCCGGGTATTGGTTCACTGTGGCGCTCATTGACGTAATGGGACGGTTTGCAATTCAATTGATGGGGTTTTTCTTCATGACGGTATTTATGTTCGCATTGGCCATTCCATACAAGCATTGGACTTTAGAAGCCAATAGAATTGGGTTTGTTGTGATGTATTCGTTGACGTTCTTCTTCGCAAATTTTGGGCCAAATGCCACCACTTTCGTGGTTCCAGCAGAGATATTTCCAGCCAGACTTCGATCGACGTGCCATGGAATATCGGCTGCTTCTGGAAAAGCAGGGGCAATTGTGGGGGCGTTCGGGTTTCAGTATGCTGAAAAGGGGATTGGAGTGAAGAAGACATTGATAATTCTTGGTGTTGTGAATGCTCTTGGTATGTTCTTCACTCTGTTGGTTCCGGAATCGAAGGGGAAGTCTTTGGAAGAAATGTCGGGTGAAGCTGGAGATGAGGCAGAGAGCAAAGCAGAGTCAAGGACTCAATCTGATCACAGAACTATGCCTGTTTGA 1746 46.79 MEKLISGGKEGEKKRDKNGIFGAKRDSDSKHVSWRVLPLLKYPIIPSSFLSIAAPSSSSSSIFRRSEDRGHSVLTLIRSTLLRGRILRRENAYDLFCVSLVTKLLGRIYYHKEGSDKPGELPSNIAAAINGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKFPSPSYKDNPTASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQEKIDEGKSKNNDFGLFSMSFVRRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPPPETMNAIEEVFRIAKAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGIGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEAGDEAESKAESRTQSDHRTMPV 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3848366 3852997 - CmPI595203_05g004610.1 Cmu05g0461 415375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0461 581 Gene3D MFS general substrate transporter like domains 328 574 IPR036259 -
Cmu05g0461 581 Gene3D MFS general substrate transporter like domains 91 323 IPR036259 -
Cmu05g0461 581 ProSiteProfiles Major facilitator superfamily (MFS) profile. 80 550 IPR020846 GO:0022857(InterPro)
Cmu05g0461 581 CDD MFS_PhT 92 549 - -
Cmu05g0461 581 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 56 555 - -
Cmu05g0461 581 MobiDBLite consensus disorder prediction 1 22 - -
Cmu05g0461 581 SUPERFAMILY MFS general substrate transporter 122 557 IPR036259 -
Cmu05g0461 581 Pfam Sugar (and other) transporter 93 557 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu05g0461 581 NCBIfam phosphate:H+ symporter 91 559 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cmu05g0461 581 MobiDBLite consensus disorder prediction 554 581 - -
Cmu05g0461 581 FunFam Inorganic phosphate transporter 1-6 77 571 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0461 Cmu-Chr5:3848366 Cmu07g0175 Cmu-Chr7:1720917 2.20E-213 dispersed
Cmu05g0461 Cmu-Chr5:3848366 Cmu05g0462 Cmu-Chr5:3864557 4.20E-212 tandem
Cmu05g0461 Cmu-Chr5:3848366 Cmu06g0688 Cmu-Chr6:7997819 3.40E-214 wgd
Cmu05g0461 Cmu-Chr5:3848366 Cmu07g0156 Cmu-Chr7:1487656 4.20E-212 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0461 K08176 - csv:101209582 863.603