Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0462 ATGGCTCAAGAACTGGGAGTTCTAAATGCACTTGATGTTGCAAAGACTCAATGGTACCATTTCACAGCCATCATCATAGCTGGAATGGGGTTCTTCACCGATGCCTACGATCTTTTTTGCATTGCGGTCGTGTCAAAGTTGCTCGGTCGCATATACTACTACACGCCAGGGTCGGGGCGGCCAGGGTCGCTTCCTCCAAACGTGTCGGCGGCAGTGAGTGGCGTGGCGCTTTGTGGAACTCTGAGCGGGCAACTGTTTTTCGGGTGGCTGGGTGACAAGATGGGAAGGAAGAAAGTGTATGGGATAACGTTGATTCTGATGGTGATATGTTCATTTGGGTCAGGGCTAAGTTTTGGGCACTCGGCCAAAGCAACATTGACAACATTATGTCTATTTCGGTTCTGGCTTGGGTTTGGGATTGGTGGTGATTATCCACTTTCCGCAACAATTATGTCCGAATATGCAAATAAGAAAACTCGTGGGGCTTTTATAGCAGCTGTTTTTGCCATGCAAGGTTTCGGAATTTTGGCTGGTGGGATCGTCGCTTTGATTGTTTCAGCTGCATTCAATAATAGATTCCCAGCTCCCTCATATGAGATTGACGCGGTGGGGTCAACCGTACCAGAGGCGGACTATGTATGGCGCATAGTTCTAATGTTTGGCGCCATCCCTGCCGGAATGACATACTACTGGCGTATGAAGATGCCGGAAACAGCCCGTTACACGGCTCTAGTGGCGAAGAATGCGAAACAAGCCGCGGCGGACATGTCGAAAGTGTTACAAGTAGAGGTGGAGGCAGAGGAAGAGAAGCTAGAGAAGATAGTAAGCACAACCAGAAACAACTTTGGCTTGTTTTCCAAACAGTTCCTCAAACGCCATGGCCTCCACTTGCTTGGAACCACAAGCACTTGGTTCTTACTCGACATTGCATTTTACAGCCAAAATCTCTTCCAAAAAGACATCTACACTGCAATTGGTTGGCTCCCTCCCGCAAAAACAATGAGCGGCCTCGAGGAGTGCTATCGTATCGCCAAGGCTCAGACGCTGATTGCACTTTGTGGGACTGTGCCCGGCTATTGGTTCACCGTGGCTCTGATTGATATTATTGGTAGATTCACTATCCAATTAATTGGGTTCATTATGATGACTATTTTCATGTTTGCCATTGCCATCCCTTACAACCATTGGATTTTGAAAGAGAATCGAATTGGGTTTGTGGTCATGTATTCCTTGACCTTTTTCTTCGCCAATTTTGGGCCTAATTCCACTACTTTCATTGTTCCTGCTGAAATATTCCCGGCAAGACTTAGGTCCACATGTCACGGCATCTCTGCTGCCGCCGGCAAGGCTGGTGCAATCATTGGTGCTTTTGGGTTCTTGTATGCAGCGCAAAATCCTGACCCGACAAAAACTGACCCAGGTTACCCACCGGGTATTGGTGTTAAGAACTCTCTTATTGCACTTGGTTGCATCAACTTCCTTGGTGGTTTACTCACCTTGTTAGTGCCCGAACCTAAAGGAAAATCACTTGAGGAGTTGACCGGAGAGAACGAGGCGCCGGAAGAAAATGTCGTCGGGCAACCACAAGTGTGA 1593 47.9 MAQELGVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCIAVVSKLLGRIYYYTPGSGRPGSLPPNVSAAVSGVALCGTLSGQLFFGWLGDKMGRKKVYGITLILMVICSFGSGLSFGHSAKATLTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAAFNNRFPAPSYEIDAVGSTVPEADYVWRIVLMFGAIPAGMTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEVEAEEEKLEKIVSTTRNNFGLFSKQFLKRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIYTAIGWLPPAKTMSGLEECYRIAKAQTLIALCGTVPGYWFTVALIDIIGRFTIQLIGFIMMTIFMFAIAIPYNHWILKENRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQNPDPTKTDPGYPPGIGVKNSLIALGCINFLGGLLTLLVPEPKGKSLEELTGENEAPEENVVGQPQV 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3864557 3866885 - CmPI595203_05g004620.1 Cmu05g0462 415376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0462 530 FunFam Inorganic phosphate transporter 1-6 19 526 - -
Cmu05g0462 530 NCBIfam phosphate:H+ symporter 10 516 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cmu05g0462 530 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Cmu05g0462 530 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 8 512 - -
Cmu05g0462 530 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu05g0462 530 CDD MFS_PhT 24 506 - -
Cmu05g0462 530 Gene3D MFS general substrate transporter like domains 270 528 IPR036259 -
Cmu05g0462 530 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
Cmu05g0462 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857(InterPro)
Cmu05g0462 530 MobiDBLite consensus disorder prediction 509 530 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0462 Cmu-Chr5:3864557 Cmu06g0688 Cmu-Chr6:7997819 2.80E-255 dispersed
Cmu05g0461 Cmu-Chr5:3848366 Cmu05g0462 Cmu-Chr5:3864557 4.20E-212 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0462 K08176 - csv:101213007 973.77