Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0647 ATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCCGATGAAGATGGTAATGGTGTGAAAGAAGCTACTAAGAAGGATTCAGCCAAGGATGGCTCCACCGCTCAGTCTCACCATGTTAGAAGAGTGAGCTCAGATAAATCGAAGTCACGGAGTGTATCTGATGCTAAGAAGGAGCCAACTGTTCAAAAGGATGGAACAACAGCACATATTGCTGCTCAAACATTTACATTCCGGGAGCTTGCTACAGCGACGAAGAACTTTAGATCAGAATGCTTGCTCGGAGAAGGGGGGTTTGGAAGGGTTTACAAAGGTCGCTTGGAGAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTTCAAGGAAATCGGGAATTTTTGGTGGAGGTTCTAATGCTTAGCCTGTTACATCACCCTAATCTTGTTAACTTGATAGGCTATTGTGCTGACGGGGATCAACGTCTTCTTGTTTATGAGTTCATGCCATTGGGTTCATTGGAAGATCATTTGCATGACCTTCCTCCAGATAAGGAGCCCTTGGATTGGAATACGAGAATGAAGATTGCAGCTGGTGCTGCAAAAGGATTGGAATATTTGCATGACAAAGCAAACCCGCCTGTTATATATCGAGACTTGAAGTCGTCTAATATTCTTCTTGACGAGGGCTACCACCCCAAGCTGTCAGATTTCGGTCTTGCAAAACTGGGTCCAGTTGGTGACAAGACTCATGTCTCTACGAGAGTGATGGGAACATACGGTTACTGTGCTCCTGAGTATGCTATGACTGGCCAACTCACTCTCAAATCAGATGTATATAGTTTTGGAGTTGTCTTTTTGGAACTTATCACGGGTCGCAAGGCAATCGATAATACTAGAGGTCCAGGGGAGCATAATCTTGTGGCATGGGCTCGGCCACTTTTTAAAGATCGCCGGAAGTTCCCTAAGATGGCTGATCCACTACTGCAGGGTCGATATCCCATGCGGGGACTTTATCAGGCATTGGCAGTTGCAGCAATGTGCTTACAGGAACAGGCTGCAACGAGACCTCTAATTGGGGATGTTGTTACTGCTTTGACGTATTTAGCTTCCCAAACTTACGATCCTAATGCAGCTGCTTCTCAAAGCAATCGAATGGGTGGATCTACCCCACGAGCCCGAGATGAGCGGAGAGGTTTTCCAGATGGACTGGATAGCCCTGATGAGCGTGGACGAGGACGTGGTTCCCCATCGAACTACAGAAACTCACCTGATTACCGAAAGAAAGACCTCCATAGGGAAATGAGTTGTGGAGGTACAGAGCTGAGCAAAATCGACACTGGAGGCGGATCTGGTCGAAAATGGGGATTGGATGAGCTAGAGCGACAAGAATCTCTGCGAGACAGTCCTGTATATACTGGGAGAGCAAGGGAAACACCAAGGAACCGCGACCTAAACAGAGAACGTGCAGTTGCAGAAGCAAAAGAAATGAAGTTGCCAGTGCCTACTAGACTACAGGTAAAAATTGCAGGAAGAAGAGGAAGGAAAGATTCAGATTACAAAACTACAGCATTTATCTTTCCTCGATTCAAGTCGGTGCCGTCGCCGGTAGTTGAACGTGTCGATCATCGGCAGAACCGCCAAATTGCCGGGCTGCTTTTCTCCTTTTCCGAATTGTTGACAGTGGCGATTTTTGCTTGCCTGATCGCTTTTTCCGTCGGAAGGGAGTTCAGATTGAACCACAAGCACAGCGGTGATGATATTTCCTTTAACCATACTCTTGCCGAAATCTTGGTGGAGTATGCTTCTGCGGCATACATATCTGATTTAACGGAACTGTTTACTTGGACATGCACAAGATGCGATGACCTGACTCAGGGGTTTGAAGTTATAGAACTGGTTGTTGATGTCCAGCACTGTCTACAGGCATATGTTGGAGTAGCAAAGAGTCTAAATGCTGTCATTATTGCTTTTAGAGGAACTCAAGAAAACAGCGTACAGAACTGGATTGAAGACCTATACTGGAAGCAGCTTGACCTGATGTACCCTGGCATGCCAGATGCAATGGTGCACCATGGGTTTTATTATGCCTATCACAATACAACAATACGCCCTGCAATATTAAGTGCTGTCGATAGAGCCAGGAAGTTCTATGGTAACCTTGACATCATGGTGACTGGACATTCAATGGGTGGGGCAATGGCAGCATTTTGTGGCCTTGATCTTGCAGTTAACTACAATTCCCAGAATGTCCAGGTTATGACATTTGGACAACCTCGTATTGGCAATGCAGTATTTGCATCTTACTATAGCAATATAGTGCCAAATTCGTTTCGGGTTACGAATGGAAATGATGTCGTCCCCCATTTGCCTCCATTTTATGCTTATTTTCCTAAAAAAACATATCACCATTTTCCTAGAGAGGTTTGGCTTTATAATGTTGGATTCGGAAGTTTTGTTTATCAAGTTGAAAAGGTTTGTGATGATTCTGGTGAAGACCCATCTTGTAGCAGGTCTGTCTCAGGGAAAAGTATTTCAGATCATTTGGTGTACTATGGTGTTGAGTTAAGTAGTCCAGCATGGAGATCATGTAGATTTGTAATGGATCCTCCTCTGGCGGCATACGGAGCAACAGATCTGAACGGAAACCGAGTTTTCTCTAGGGATCCTGGAATTCCTCTTATCAGACTGAACAAACAATCGGGAACAGGCAAAGTTTTCAAAGATTTAGGGGCTTTAAGTTCGAGGGATCCAGGAGTCAAGAGCGAATAG 2754 45.35 MGGCFPCFGSSDEDGNGVKEATKKDSAKDGSTAQSHHVRRVSSDKSKSRSVSDAKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRSECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAAASQSNRMGGSTPRARDERRGFPDGLDSPDERGRGRGSPSNYRNSPDYRKKDLHREMSCGGTELSKIDTGGGSGRKWGLDELERQESLRDSPVYTGRARETPRNRDLNRERAVAEAKEMKLPVPTRLQVKIAGRRGRKDSDYKTTAFIFPRFKSVPSPVVERVDHRQNRQIAGLLFSFSELLTVAIFACLIAFSVGREFRLNHKHSGDDISFNHTLAEILVEYASAAYISDLTELFTWTCTRCDDLTQGFEVIELVVDVQHCLQAYVGVAKSLNAVIIAFRGTQENSVQNWIEDLYWKQLDLMYPGMPDAMVHHGFYYAYHNTTIRPAILSAVDRARKFYGNLDIMVTGHSMGGAMAAFCGLDLAVNYNSQNVQVMTFGQPRIGNAVFASYYSNIVPNSFRVTNGNDVVPHLPPFYAYFPKKTYHHFPREVWLYNVGFGSFVYQVEKVCDDSGEDPSCSRSVSGKSISDHLVYYGVELSSPAWRSCRFVMDPPLAAYGATDLNGNRVFSRDPGIPLIRLNKQSGTGKVFKDLGALSSRDPGVKSE 917
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5533543 5545696 - CmPI595203_05g006470.1 Cmu05g0647 415561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0647 917 MobiDBLite consensus disorder prediction 417 433 - -
Cmu05g0647 917 SUPERFAMILY Protein kinase-like (PK-like) 68 360 IPR011009 -
Cmu05g0647 917 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524(InterPro)
Cmu05g0647 917 Pfam Lipase (class 3) 649 787 IPR002921 GO:0006629(InterPro)
Cmu05g0647 917 Pfam Protein kinase domain 90 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g0647 917 PANTHER OS07G0668900 PROTEIN 35 379 - -
Cmu05g0647 917 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g0647 917 Gene3D Transferase(Phosphotransferase) domain 1 163 381 - -
Cmu05g0647 917 SMART serkin_6 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g0647 917 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Cmu05g0647 917 MobiDBLite consensus disorder prediction 1 64 - -
Cmu05g0647 917 MobiDBLite consensus disorder prediction 372 456 - -
Cmu05g0647 917 MobiDBLite consensus disorder prediction 16 62 - -
Cmu05g0647 917 SUPERFAMILY alpha/beta-Hydrolases 585 849 IPR029058 -
Cmu05g0647 917 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu05g0647 917 Gene3D alpha/beta hydrolase 585 853 IPR029058 -
Cmu05g0647 917 CDD Lipase_3 585 805 - -
Cmu05g0647 917 MobiDBLite consensus disorder prediction 384 409 - -
Cmu05g0647 917 Gene3D Phosphorylase Kinase; domain 1 56 162 - -
Cmu05g0647 917 FunFam Serine/threonine-protein kinase PBS1 59 162 - -
Cmu05g0647 917 CDD STKc_IRAK 92 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2275 Cmu-Chr1:35047392 Cmu05g0647 Cmu-Chr5:5533543 1.40E-42 dispersed
Cmu02g1369 Cmu-Chr2:27264732 Cmu05g0647 Cmu-Chr5:5533543 5.70E-160 dispersed
Cmu02g2065 Cmu-Chr2:34297523 Cmu05g0647 Cmu-Chr5:5533543 8.90E-131 dispersed
Cmu05g0647 Cmu-Chr5:5533543 Cmu10g2786 Cmu-Chr10:34455541 7.20E-150 dispersed
Cmu07g1400 Cmu-Chr7:29257060 Cmu05g0647 Cmu-Chr5:5533543 9.30E-08 dispersed
Cmu03g1693 Cmu-Chr3:21301187 Cmu05g0647 Cmu-Chr5:5533543 3.90E-122 transposed
Cmu06g0182 Cmu-Chr6:1924695 Cmu05g0647 Cmu-Chr5:5533543 5.60E-175 transposed
Cmu06g0527 Cmu-Chr6:5833264 Cmu05g0647 Cmu-Chr5:5533543 1.60E-121 transposed
Cmu09g1023 Cmu-Chr9:10316235 Cmu05g0647 Cmu-Chr5:5533543 9.20E-124 transposed
Cmu10g1360 Cmu-Chr10:6560225 Cmu05g0647 Cmu-Chr5:5533543 3.30E-139 transposed
Cmu10g2083 Cmu-Chr10:26788910 Cmu05g0647 Cmu-Chr5:5533543 1.20E-76 transposed
Cmu03g2269 Cmu-Chr3:31385004 Cmu05g0647 Cmu-Chr5:5533543 1.30E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75518 PF00069 Pkinase 2.70E-45 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0647 - - - 0.0