Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0736 ATGGCGTCGTCTCTGATTCTGAATCCTGTGGCGACTTCTGAGCGATCGCGTGATTCATCCAGAAAGAAGAAGAAGAAGAAAGCAACAAGGGAAGATGATCGTCAAGATCAAGATCACATCAAATGGAAATCACAAGCTCAGCATCAAGTTTACTCTTCGAAGCTGTTGCGCGCCTTGAATCAGGTCAGGATCAGTTCTCCTGAATCGACACCAAACGAAACGCCGCGCCGTGGCCGAGCGGTGCGGGAGGCTTCCGATACGGTTCTAGCCTTGACGGCAAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGTAATAAACACAATCGGCAGAAGGCGCGTGTGACCGGAAACAGCCGCACGAAGAAACCTAGTGTTAGCGTTTTGCGGTTTAGAGGGAAGGGATCACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGGCTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATTCCGGCACTGGAGATGCAGATCCGTGTCATGAACGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCATCTTCTTCTGGTATCGATTCTTCTACCTGA 627 50.24 MASSLILNPVATSERSRDSSRKKKKKKATREDDRQDQDHIKWKSQAQHQVYSSKLLRALNQVRISSPESTPNETPRRGRAVREASDTVLALTAKGRSRWSRAILTNRLKLKFRNKHNRQKARVTGNSRTKKPSVSVLRFRGKGSPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMNAIVNLVSSSSSSSSGIDSST 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6375046 6375672 + CmPI595203_05g007360.1 Cmu05g0736 415650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0736 208 MobiDBLite consensus disorder prediction 62 83 - -
Cmu05g0736 208 MobiDBLite consensus disorder prediction 25 43 - -
Cmu05g0736 208 CDD bHLH_AtIBH1_like 136 191 IPR044549 GO:0006355(InterPro)
Cmu05g0736 208 MobiDBLite consensus disorder prediction 1 47 - -
Cmu05g0736 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 39 194 IPR044660 GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1481 Cmu-Chr2:28557368 Cmu05g0736 Cmu-Chr5:6375046 4.80E-27 dispersed
Cmu05g0736 Cmu-Chr5:6375046 Cmu06g0428 Cmu-Chr6:4891733 1.80E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0736 - - - 0.0