Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0749 ATGGCTCTCGACGCCGAAGCTGCACCAGCGGCGGAGTTGGCGCTTGCTGATACCGACATCAACTGGAACAGGTTGGACAAGACAAAGTTTCATATAATTGGGGCAATACTCTTTACGGCTCAGTCAGCCTTGTTACATCCAACAGCGGTTGTAAAAACTAGAATGCAAGTTGCTGGGTCTGGTCTATCTCACATACGTGGACTGTCAGTTTTCTGGAATATATTGAAGTCTGATGGAATCTCTGGCTTGTATAGAGGTTTTGGTACTTCAGCGATTGGATCATTACCTGGTAGAGTATTGGCTTTAACATCACTAGAAGTATCAAAAGACATGATGTTGAAATATACTGGAAATTTGGAGATGTATGAAGCAACACGTGTTGGTCTTGCTAATGGAGTGGCAGGCATGATCTCGAATTTAGTTTCATGCATATACTATGTGCCATTGGACGTGACTTGCCAGAGACTGATGGTTCAAGGGCTTCCTGGAACCACCTTCTGCAATGGCCCACTTGATGTTGTCAGAAAAGTGATGAAGGCTGAAGGATTTCGTGGTTTATATAGGGGTTTTGGATTAACGGCTGTAACTCAGTCCCCAGCATCTGCTCTCTGGTGGGGTGTTTATGGTGCTGCTCAGCATATTATCTGGAGGAGCTTAGGATATCAAGATAGCATGGAGAAGAAACCTTCTCACATGGAGATGGTGACGGTTCAGGCCACAGCAGGAATGGTGGCAGGTGCTTGTTCCTCTGTTATTACAACTCCCGTAGACACAGTAAAGACGCGACTTCAGGTCATCGATAACTATGGAATTGGAAGACCATCCGTGCTCAAGACTTCAAGAGCACTTCTCAAGGAAGATGGATGGTTGGGATTTTATAGAGGCTTTGGACCTCGGTTTTTGAATATGTCACTTTATGGAACCACGATGATAGTCACTTATGAACTGATCAAGAGACTTTCCTTAAAGGACATCGTGACATCTTGA 987 44.68 MALDAEAAPAAELALADTDINWNRLDKTKFHIIGAILFTAQSALLHPTAVVKTRMQVAGSGLSHIRGLSVFWNILKSDGISGLYRGFGTSAIGSLPGRVLALTSLEVSKDMMLKYTGNLEMYEATRVGLANGVAGMISNLVSCIYYVPLDVTCQRLMVQGLPGTTFCNGPLDVVRKVMKAEGFRGLYRGFGLTAVTQSPASALWWGVYGAAQHIIWRSLGYQDSMEKKPSHMEMVTVQATAGMVAGACSSVITTPVDTVKTRLQVIDNYGIGRPSVLKTSRALLKEDGWLGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSLKDIVTS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6612702 6615911 + CmPI595203_05g007490.1 Cmu05g0749 415663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0749 328 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 324 - -
Cmu05g0749 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 111 IPR018108 -
Cmu05g0749 328 Pfam Mitochondrial carrier protein 32 115 IPR018108 -
Cmu05g0749 328 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Cmu05g0749 328 Pfam Mitochondrial carrier protein 237 322 IPR018108 -
Cmu05g0749 328 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Cmu05g0749 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Cmu05g0749 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Cmu05g0749 328 Gene3D Mitochondrial carrier domain 32 324 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0749 Cmu-Chr5:6612702 Cmu11g0495 Cmu-Chr11:5359141 3.00E-82 dispersed
Cmu05g0749 Cmu-Chr5:6612702 Cmu09g0081 Cmu-Chr9:1017029 6.30E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0749 K15121 - csv:101213375 616.305