Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0763 ATGAGAGTTGGGAAGTATGAGTTGGGGAAAACTCTTGGAGAAGGCAATTTCGGCAAGGTGAAGTTGGCCGCCGACATCCGTACCGGCCGTCGTTACGCCGTCAAGATCCTTGATAAGACCAAGATTCTCCATCTCAACTTCTCCGATCAGATTAAACGTGAAATAAGTACTCTCAAGCTCCTCAGGCATCCGAATGTTGTAAGACTTTACGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTTTGGAGTGCGCCTCTGGTGGAGAATTGTTTGATAGAATTGAATCGAAGGGTAAAATGGATGAAGTTGAAGGTCGGAGGCTCTTCCAGCAGCTTATTGATGGTCTTAGCTACTGCCATGACAAAGGAGTTTACCACAGGGATCTCAAGTTGGAAAACGTGCTTGTTGATGCTAAGGGAAATATTAAGATTTCTGATTTTGGCCTCAGTGCTTTACCGCAGAATTGCAGGGAAGATGGTTTGCTGCACACAACCTGTGGAAGTCCCAACTATGTTGCACCAGAGGTTCTTGCTAATAGAGGATACAATGGAGCCGCCTCTGATATATGGTCATGTGGGGTTATCTTGTATGTTATTCTTACGGCTTTTCTTCCTTTTGACGAGACCAATCTGGCTTTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGATACCCAAATGGTTATCAGCAGGTGCCAGAAATTTGATAAGGAGAACTCTTGACCCCAATCCCAATACTCGGATTACCATGGCAGGAATTAAAGAGAATGAGTGGTTCAAGACTGACTACCATCCTGCTTCTCCTGGTTATGACGACGATGATGAGGAGGGTTCACTTACTGATCAGGATGATGCCATCTCAACGCCTGATGAGCCATCTGACGTTGAAAACAGCCCAGAATCTCCTTCTATTATCAATGCGTTTGAGTTAATTGGGATGTCTTCAAGTTTGGATTTGTCTGGCTTCTTTGAGCAAGAGGATGTCTCCGAGAGGAAGATCAGATTTACATCCAACCATTCTGCCAAAGACTTGCTTGAGAGAATCGAGGTTATCGCAACGGATATGGGATTTCGAGTTCAAAAGAAAAGTGGAAAGTTGAAATTGATTCAAGAGATAAGAAGTCAAAAAAGCCTAAGTAATCTATCATTTGTAGCCGAGGTCTTTGAGATAAGCCCATTGCTTCACGTAGTTGAACTGAAAAAATCTTTTGGAGATTCATCAGCTTATAGACAGTTGTGTGAAAGGCTGTCAAATGATTTGGGCACAAACCCAGAGCTGGAACGGCAAAATTCAAGCTCATTCGCATTAAACACTACATGCTAG 1329 42.89 MRVGKYELGKTLGEGNFGKVKLAADIRTGRRYAVKILDKTKILHLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVLECASGGELFDRIESKGKMDEVEGRRLFQQLIDGLSYCHDKGVYHRDLKLENVLVDAKGNIKISDFGLSALPQNCREDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTAFLPFDETNLALLYKKTLRGDFQIPKWLSAGARNLIRRTLDPNPNTRITMAGIKENEWFKTDYHPASPGYDDDDEEGSLTDQDDAISTPDEPSDVENSPESPSIINAFELIGMSSSLDLSGFFEQEDVSERKIRFTSNHSAKDLLERIEVIATDMGFRVQKKSGKLKLIQEIRSQKSLSNLSFVAEVFEISPLLHVVELKKSFGDSSAYRQLCERLSNDLGTNPELERQNSSSFALNTTC 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6711538 6714265 + CmPI595203_05g007630.1 Cmu05g0763 415677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0763 442 Gene3D Transferase(Phosphotransferase) domain 1 2 304 - -
Cmu05g0763 442 Gene3D Kinase associated domain 1, KA1 305 424 - -
Cmu05g0763 442 SUPERFAMILY Protein kinase-like (PK-like) 3 262 IPR011009 -
Cmu05g0763 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu05g0763 442 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 412 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cmu05g0763 442 MobiDBLite consensus disorder prediction 284 302 - -
Cmu05g0763 442 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g0763 442 SMART serkin_6 6 261 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g0763 442 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165(InterPro)
Cmu05g0763 442 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524(InterPro)
Cmu05g0763 442 CDD CIPK_C 308 419 - -
Cmu05g0763 442 FunFam Non-specific serine/threonine protein kinase 1 85 - -
Cmu05g0763 442 Pfam Protein kinase domain 6 261 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu05g0763 442 FunFam Non-specific serine/threonine protein kinase 304 426 - -
Cmu05g0763 442 FunFam Non-specific serine/threonine protein kinase 1 303 - -
Cmu05g0763 442 Pfam NAF domain 304 363 IPR004041 GO:0007165(InterPro)
Cmu05g0763 442 MobiDBLite consensus disorder prediction 266 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0763 Cmu-Chr5:6711538 Cmu06g0402 Cmu-Chr6:4592160 9.20E-111 dispersed
Cmu11g1502 Cmu-Chr11:27341239 Cmu05g0763 Cmu-Chr5:6711538 7.70E-37 dispersed
Cmu05g0763 Cmu-Chr5:6711538 Cmu06g0401 Cmu-Chr6:4576391 1.70E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75519 PF00069 Pkinase 1.70E-70 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0763 K07198 - csv:101205987 848.195