Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0847 ATGGGTTTTCGGTTCCTTATGGCGAGAAGAGGAGGAGCAATTGGATCGTGGCTCTGCATCGTTGTGGTTTTAATTTCTACGCAAATTCACGTCTCAGCCAGATCGGATAAGGAAATCAGGGAGAGATTTTATGGAAACTTGATAAACTCGACGGCTCCGACTTCCGGTGACGGTAGCATTGCCCAAATGTTCGATAAGGTTCTTGAGAAGGAGTTCTCTGACAATGATCTGCCTGAAGGTTCTGGTGGAAGCAGCTTTAATAGCAGCGTTGCTGATCAGGAGGCAGAACTGGAGACGGTAGCTAAAATCACACATGAGAAGGGCAAGAAAAATGATAGTCAAAAGGCAAATGGGACAAGGGCATTCCAATTTCAGGATGTTTTTTCTCTGGAAAATGAAGAATCTGATGATGTTACAACGTTGATTGATAAAAAAGACAATGTATTTGTGATGTCAAACAAGAAGTCAAAGTATCCAGTACTTCAAGTAGATTTGAGATTGATCTCAGACTTGGTGGTGGTTATTGTTTCTGCCGCAATTGGAGGAATTATCTTTTCTTGTTTAGGGCAACCTGTTATTGTGGGCTATCTTCTTGCGGGGTCAATCATCGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTTGTATTTCTTCTTTTTGCTTTAGGACTGGAGTTTTCTTTGACAAAGTTAAAAGTTGTGGGAGCTGTGGCTGTTTTTGGAGGTTTTCTACAGATCATCATATTTATGTTTTTGTGTGGTATCATTGCCATGTTAAGTGGAGCTAAACTGTCGGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCTACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGGAATAGCAGTAATACTCTTCATGGTCAAGTTACTATTGGAACACTCATCTTACAGGATTGCGCTGTTGGTTTGTTGTTTGCCTTGCTCCCAGTTTTGGGTGGTCACAATGGTCTTATTTTAGGAATGATATCTATGGGGAAGTTGCTACTGGTGTTGTCAGTATATCTCACAGCTGCATCTATTTTGTCATGGTCATTTGTTCCCCGCTTTCTTAAGCTGATGATGCAGCTGTCGTCTCAAACAAATGAGTTGTATCAGCTTGCTGCTGTGGCATTTTGCTTGCTGTCTGCTTGGTGCAGTGATAAGCTGGGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGATATCTACCACTGACTTCGGTCAGCATACTTTAGATCAGGTGGAGCCAATCCGCAATTTATTTGCAGCTTTGTTCCTTTCAAGTATTGGAATGCTCATTCATGTACATTTTCTGTGGAGCCATTTGGACATTTTGCTAGCATCTGTAATGCTGGTTGTGTTTGTCAAGACAGCAGTTGCTACCGTTGTTGCAAAGGCATTTGGATACAGTATTAGGACTTCTTTTCAGGTTGGGGTCATGCTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTAAGCCGTGCTTCAAATCTTCATCTCATTGGGGGGAAAGTTTATTTACTTCTTCTTGGAACAACTGCACTTAGTCTGGTGACCACCCCTCTTCTGTTCAAATTGATACCTGCCGTGTTAAATTTAGGGGTTCTCATGCATTGGTTCCCCTCTGAAAACAACATACAAAATGAGTATAGTCGTCTCCCCTCCTCTGAAAGGTTTGTGAATATCAGAGCCGATTTCTCAGCCTTAATCGATTTTGGTTTTGGAGATTCTTTACTAGGGCGGTCTTTTGATTTTGAGACAAGGCAACCTCATGGTCATCTGCCAAATCCATACCGCAAATTGAAAGCTCCACCACTCCCTCCACCTCCCCCCTCCGACGCCGGTCGTTCACATGCATCTCCGGTGAACCAGAAACCACCTGGAGCTCGAACTCAGATTCGTAATTCCCGATATCGAACCTGA 1971 42.97 MGFRFLMARRGGAIGSWLCIVVVLISTQIHVSARSDKEIRERFYGNLINSTAPTSGDGSIAQMFDKVLEKEFSDNDLPEGSGGSSFNSSVADQEAELETVAKITHEKGKKNDSQKANGTRAFQFQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFLCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTAASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVATVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLLGTTALSLVTTPLLFKLIPAVLNLGVLMHWFPSENNIQNEYSRLPSSERFVNIRADFSALIDFGFGDSLLGRSFDFETRQPHGHLPNPYRKLKAPPLPPPPPSDAGRSHASPVNQKPPGARTQIRNSRYRT 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7610106 7620564 - CmPI595203_05g008470.1 Cmu05g0847 415761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0847 656 Pfam Sodium/hydrogen exchanger family 175 541 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cmu05g0847 656 MobiDBLite consensus disorder prediction 616 631 - -
Cmu05g0847 656 MobiDBLite consensus disorder prediction 609 656 - -
Cmu05g0847 656 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 567 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Cmu05g0847 656 Gene3D - 165 548 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2163 Cmu-Chr3:30118439 Cmu05g0847 Cmu-Chr5:7610106 4.60E-185 dispersed
Cmu05g0847 Cmu-Chr5:7610106 Cmu08g1635 Cmu-Chr8:28037551 2.90E-185 dispersed
Cmu05g0844 Cmu-Chr5:7601087 Cmu05g0847 Cmu-Chr5:7610106 3.30E-06 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0847 K26735 - csv:101207607 1014.6