Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0855 ATGGCTAATACTCCTCTCAAATGGCTCTGTTTATTGCTGTTTTTTCACTGTTTGATTCTTTCAACCTCTCAGCTTCTGAAAACTTATGTTGTTCAAATGGATAAGACTGCAATGCCGGACTCATTTACGGATCATCTTGACTGGTACTCTACAGTGCTAAGCAATGTGGTTGTTAATCTTGAAAGAGAAGGTAATGGGGGAGGAGGTGCAGAGAGGATTATTTACAGTTACCATAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGCTGAGAAGCTCGAGGAAGAGGATGGGGTATTGGCCATTTTTCCTGAGACGAAGTATGAGCTTCATACTACCAGAAGCCCCAAATTTCTTGGGCTTGAACCAGCTGATAGCAATAGCGCCTGGTCTCAGCAAGTTGCAGACCATGATGTGATTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAAAGTGAGAGCTTCAACGACGTCGGAATGTCGCCGGTGCCGGCGCATTGGAAAGGGGAATGTGAAACAGGACGAGGGTTCACGAAACAGAATTGTAATAGAAAGATCGTTGGGGCCAGAGTGTTCTACCATGGGTATCAAGCTGCAACTGGGAAATTTAACGAGCAGTTGGAGTACAAATCGCCAAGGGATCAAGATGGGCATGGAACTCATACGGCAGCCACTGTCGCTGGCTCTCCAGTGCCCGGCGCGAGCCTCCTTGGTTATGCATATGGAACGGCCAGAGGAATGGCGCCCGGAGCTAGAATTGCGGCTTACAAAGTTTGTTGGGTTGGTGGCTGTTTTAGCTCCGACATTTTGTCGGCTGTTGACAGAGCTGTGGCCGACGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGTCTCTCCGTTGCAGCATTTGGAGCAATGGAGATGGGCGTGTTTGTCTCCTGCTCGGCCGGAAATGGAGGGCCAGACCCTGTCAGTCTCACAAATGTATCACCATGGATAACCACTGTCGGCGCTAGCACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGTAATGGCAGAACAGTCACCGGCGTTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAGCAATTCCCAGTTGTATACATGGGGAGTAACTCGAGTAGTCCTGATCCGAGCTCCCTGTGTTTAGAAGGAACTTTAGATCCTCATTTCGTGGCCGGAAAAATTGTGATATGCGATCGCGGGATTAGCCCTCGGGTTCAGAAGGGTGTGGTGGTGAAAAATGCAGGTGGGGTTGGGATGATTCTGTCTAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGACTGCCATTTGGTACCGGCAGTTGCCGTCGGGGAAAGAGAAGGCAAAGCAATTAAGCAGTACGCATTAACGAATCGAAAAGCGACGGCGACTTTAGGGTTTTTAGGGACAAGATTGGGGGTAAAACCTTCGCCGGTGGTGGCGGCGTTTTCATCCAGAGGACCAAATTTCCTCACACTGGAGATCCTCAAGCCCGATCTGGTGGCTCCTGGCGTTAACATCCTCGCCGCTTGGACCGGAAAAACAGGGCCGTCGAGCTTGACGACGGATACAAGAAGGGTAAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTAGCGGCTCTGATCAAATCGAAGCATCCCGATTGGAGCCCATCGGCGATCAAATCGGCACTAATGACCACCGCTTACGTCCACGACAACACCTATAAACCTCTCAAAGACTCCTCCGCTGCATCACCGTCAAGTCCGTACGACCATGGCGCCGGCCACATAAACCCTAGAAAAGCCCTCGATCCTGGTTTGGTTTACGAAATTCAGCCTCAAGATTACTTCGACTTCCTCTGTACGCAGGATTTAACCCCTACACAACTTAAAGTGTTCTCTAAATATTCGAACAGATCATGCCATCGTCTTCTCCCCAACCCTGGAGACTTGAATTATCCGGCCATCTCCGCTGTTTTTCCTGAGAAAACCTCCGTCACTTCCCTGACCCTTCACAGAATCGTCACCAACGTCGGCCCTGCAACCTCCAGTTATCGTGCAGTGGTGACTCCGTTCAACGGCGCCGCCGTGAAAGTTGAGCCGGAGAGTCTGAACTTCACAAGAAGGTATGAGAAGCTTTCTTACAGAATCACATTTCTGACGAAGAAGAGACAGAGTATCCCGGAATTTGGAGGGCTAATTTGGAAGGATGGAACTCATAAAGTGAGAAGCCCCATTGTGATCACTTGGTTGTCGTTTGTTTGA 2322 49.44 MANTPLKWLCLLLFFHCLILSTSQLLKTYVVQMDKTAMPDSFTDHLDWYSTVLSNVVVNLEREGNGGGGAERIIYSYHNVFHGVAARLSEEEAEKLEEEDGVLAIFPETKYELHTTRSPKFLGLEPADSNSAWSQQVADHDVIVGVLDTGIWPESESFNDVGMSPVPAHWKGECETGRGFTKQNCNRKIVGARVFYHGYQAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPVPGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTVTGVSLYRGRITIPENKQFPVVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGVGMILSNTAANGEELVADCHLVPAVAVGEREGKAIKQYALTNRKATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSAASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFDFLCTQDLTPTQLKVFSKYSNRSCHRLLPNPGDLNYPAISAVFPEKTSVTSLTLHRIVTNVGPATSSYRAVVTPFNGAAVKVEPESLNFTRRYEKLSYRITFLTKKRQSIPEFGGLIWKDGTHKVRSPIVITWLSFV 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7706739 7709060 + CmPI595203_05g008550.1 Cmu05g0855 415769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0855 773 CDD PA_subtilisin_like 354 483 - -
Cmu05g0855 773 Gene3D - 639 770 - -
Cmu05g0855 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 766 IPR045051 -
Cmu05g0855 773 FunFam Subtilisin-like protease SBT1.5 141 363 - -
Cmu05g0855 773 Pfam PA domain 381 469 IPR003137 -
Cmu05g0855 773 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu05g0855 773 FunFam Subtilisin-like protease SBT1.9 17 114 - -
Cmu05g0855 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Cmu05g0855 773 FunFam subtilisin-like protease SBT1.5 347 490 - -
Cmu05g0855 773 Pfam Peptidase inhibitor I9 28 114 IPR010259 -
Cmu05g0855 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Cmu05g0855 773 Pfam Fibronectin type-III domain 669 767 IPR041469 -
Cmu05g0855 773 CDD Peptidases_S8_3 111 588 IPR034197 -
Cmu05g0855 773 Gene3D - 347 491 - -
Cmu05g0855 773 Pfam Subtilase family 140 595 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu05g0855 773 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cmu05g0855 773 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Cmu05g0855 773 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Cmu05g0855 773 SUPERFAMILY Subtilisin-like 113 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu05g0855 773 ProSiteProfiles Serine proteases, subtilase domain profile. 110 622 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2104 Cmu-Chr3:29453677 Cmu05g0855 Cmu-Chr5:7706739 2.60E-222 dispersed
Cmu05g0855 Cmu-Chr5:7706739 Cmu08g1575 Cmu-Chr8:27479130 3.30E-228 dispersed
Cmu01g0946 Cmu-Chr1:13140089 Cmu05g0855 Cmu-Chr5:7706739 2.80E-82 transposed
Cmu01g2491 Cmu-Chr1:36772672 Cmu05g0855 Cmu-Chr5:7706739 3.00E-86 transposed
Cmu09g0128 Cmu-Chr9:1464371 Cmu05g0855 Cmu-Chr5:7706739 5.70E-212 transposed
Cmu01g0321 Cmu-Chr1:3381248 Cmu05g0855 Cmu-Chr5:7706739 2.00E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0855 - - - 0.0