Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0869 ATGTTCCGAACAATGGCAAAAAATGTATCACTCTTATTTCTAATGATGATGGTTTGTCTGTCGGAAGGAGTTCTTGATAGCCATTATTACTCAAAAACATGTCCTAGTGCAGAAAAAATCATCCTCCAAACCGTCTACAATGCTTCCATTAATGACCCCAAAGTCCCTGCTCGTCTTCTCAGGCTCTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAGTGTTGATAGACTCGACGCCAGAGAATCAGGCAGAGAAAGAAGCACCTCCAAACATCTCGCTAAGGTCGTTCTATGTAATCGACGAGGCCAAAGCCAAGCTTGAAAGTGCATGCCCACATACTGTTTCTTGTGCTGATATTGTCGCCATTGCTGCTAGAGATGTAGTAACTTTGTCTGGAGGCCCGTATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCCAAAGCTTCAGAGACCAACTTGCCAGCTCCAACTTTCAATGTGTCTCAACTCATCCAGACCTTTGCAAACAGAGGATTAGAAGTTAAGGACTTGATTGCTCTATCTGGGGCTCACACACTTGGATTCTCACACTGTTCTTCCTTTCAATCTAGACTTCGCAACTTCAGCTCCATTCATGAAATTGATCCTGCTTTGGAATCTGGGTTCGCCCAAATTCTAAGAAACAAATGTCCAAAACCAAATTTGGACAAAAATGCTGGACAGTTCTTGGACCCAACTTCCTCAACCTTTGACAATGTGTATTACAAGAGACTGTTGGAAGGAAAGGGTGTGTTTGGTTCAGATCAAGCGTTGTTTGCTGATTCTAGAACTAGAGGGCTTGTTGGATTGTTTGCTCAAGATCAGAACTTGTTCTTTAAGGAGTTCGCAACTTCAATGGTGAATTTGGGTAATGTTGGGACTCTCCCAATAGTTGTTGAAGAAGACAGGTCGAAGTGTTGTGTAAACCACAACTGGGCTTCTCATCTCATGGACACCATCTATCCAAACAAAAACATTATACTTGGGACTCCTGTTGTTGCTATGCCATTGTCAAATTTGATAGCTCCAACTATAACTTCGTATTGA 1080 42.31 MFRTMAKNVSLLFLMMMVCLSEGVLDSHYYSKTCPSAEKIILQTVYNASINDPKVPARLLRLFFHDCFIRGCDASVLIDSTPENQAEKEAPPNISLRSFYVIDEAKAKLESACPHTVSCADIVAIAARDVVTLSGGPYWSVLKGRKDGKISKASETNLPAPTFNVSQLIQTFANRGLEVKDLIALSGAHTLGFSHCSSFQSRLRNFSSIHEIDPALESGFAQILRNKCPKPNLDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQALFADSRTRGLVGLFAQDQNLFFKEFATSMVNLGNVGTLPIVVEEDRSKCCVNHNWASHLMDTIYPNKNIILGTPVVAMPLSNLIAPTITSY 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7926605 7929051 - CmPI595203_05g008690.1 Cmu05g0869 415783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0869 359 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cmu05g0869 359 FunFam Peroxidase 159 300 - -
Cmu05g0869 359 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 Gene3D Peroxidase, domain 2 159 300 - -
Cmu05g0869 359 SUPERFAMILY Heme-dependent peroxidases 25 319 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 Gene3D - 28 319 - -
Cmu05g0869 359 Pfam Peroxidase 44 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu05g0869 359 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g0869 359 FunFam Peroxidase 28 171 - -
Cmu05g0869 359 PANTHER PEROXIDASE 25-RELATED 18 306 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1995 Cmu-Chr1:33196653 Cmu05g0869 Cmu-Chr5:7926605 1.70E-90 dispersed
Cmu04g0350 Cmu-Chr4:11052001 Cmu05g0869 Cmu-Chr5:7926605 1.80E-71 dispersed
Cmu05g0869 Cmu-Chr5:7926605 Cmu08g1354 Cmu-Chr8:25760689 5.80E-95 dispersed
Cmu05g1646 Cmu-Chr5:26467439 Cmu05g0869 Cmu-Chr5:7926605 3.70E-64 transposed
Cmu04g0923 Cmu-Chr4:23697010 Cmu05g0869 Cmu-Chr5:7926605 8.70E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0869 K00430 - csv:101210306 557.755