Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0919 ATGAGTCCGCCCGCCGTCGAATCTCCCTTACTTCTTCTTTTCCTGCTTGCTGCAGCGCTGCGGTGCCCTCTCGCCGGAGCGCGCCTTCTGGTGGAGATGACGGTGGTCCGAAACGCCTCTTCCATCGGAGCCTTTTGTTTGGACGGAAGCTTGCCGGCGTATCACCTGGACAGAGGATTCGGCGCCGGAGCGGGAAACTGGCTTTTACAGTTCGAGGGTGGTGGGTGGTGCAATGATGTAAAGTCTTGTTTGGAGAGAGCGAATAGTCGAAGAGGATCAACGCGTTTAATGACCAAATGGGAAGACTTCTCTGGCATTCTTAGCAACAATGCTTCTCTTAATCCAGATTTTTATAACTGGAACCGTGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGCTGGAGATGCCTTGTTTGACAATGGGATATCGCTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATTCTTGACCTTCTACCAAAAGGGTTGGGGACAGCAAGGAAGGCTCTGCTTTCTGGTTGCTCTGCTGGAGGTTTAGCAACTTTTCTTCATTGTGAAAATTTCACCAAGTATTTGCCAAGGAATGCTAGTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGACATTGGTCTAAACCACACAATGAGGAACTTTTATAGGGATCTTGTGGCTCTTCAGGGGATGGAGCAAAATTTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGAATTGTGCATATTCCCTCAGTATTCATTGAAGTACATAACAACACCATTTTTCATTCTGAATTCAGCATATGATGTTTACCAATTTCATCATGGGTTGGTGCCACCATCTGCTGATTTACATGGACATTGGAACCATTGCAAATTTAATCCAGCAGAGTGTAGTGAACTACAGATTCAGGCATTGCAAGGTCTAAGAATGAGTATGCTTTCTGCATTAAGATTATTCTATGAATATTCAAGCAGAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCACAAGACACATGGTTTGCTGACGACTCCCCAACAATAGACAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTATTTTAGCAGGAGAAACACAAAGGAAATTGATTGTGCATATCCATGTGACTCTACTTGCCATAATATTATACCATAA 1194 43.72 MSPPAVESPLLLLFLLAAALRCPLAGARLLVEMTVVRNASSIGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVKSCLERANSRRGSTRLMTKWEDFSGILSNNASLNPDFYNWNRVKLRYCDGASFAGDALFDNGISLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLATFLHCENFTKYLPRNASVKCLSDAGFFLDLRDIGLNHTMRNFYRDLVALQGMEQNLNENCTASSYFPELCIFPQYSLKYITTPFFILNSAYDVYQFHHGLVPPSADLHGHWNHCKFNPAECSELQIQALQGLRMSMLSALRLFYEYSSRGGMFINSCFAHCQSESQDTWFADDSPTIDNKTIAEAVGDWYFSRRNTKEIDCAYPCDSTCHNIIP 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8329309 8344684 - CmPI595203_05g009190.1 Cmu05g0919 415833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0919 397 PANTHER NOTUM-RELATED 26 394 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Cmu05g0919 397 Pfam Pectinacetylesterase 28 377 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2377 Cmu-Chr3:32479418 Cmu05g0919 Cmu-Chr5:8329309 3.20E-111 dispersed
Cmu05g0919 Cmu-Chr5:8329309 Cmu07g1102 Cmu-Chr7:26081005 4.90E-95 dispersed
Cmu04g0857 Cmu-Chr4:23101855 Cmu05g0919 Cmu-Chr5:8329309 8.20E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0919 K19882 - csv:101216160 771.541