Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0941 ATGGCGGCCGGCCTCTCCGCCGCCTTAGTGCCCAAACCACTCCATCTCTTCCTTACTTCCTCCCATCTCTCCCCTAAACCTCGAACTCCGTTTCTGTTTCCACCTCCTGTCTTCCGGAACAGTAGATTCCAATGGAAGATGCGGAGAAAAACTCTGTTCACTGTCTGTGTACTCGTTGAGGATCAAAATAGTTCCGGTGAGGTGGAGAATCTCTCCGATGAAGGATCGCCGATTGTAATCCCTCAGATCCCATCGCCTCATGTTTCAGAAAGATTAGCAAGGAAGAAATCGGAGCGCTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTTGGAATTACCTCCATGGCTGTCATGGCGGTTTACTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCTGTTGGTGCCGCTGTGGGGATGGAGTTCTGGGCGAGATGGGCTCATAGGGCTCTCTGGCACTCTTCCTTATGGCATATGCACGAGTCGCACCATAAACCAAGAGAAGGACCGTTCGAATTGAACGATGTTTTCGCCATTGTCAACGCTGTGCCCGCCATAGCTCTTCTTTCTTACGGCTTCTTCCATAAAGGCCTTGTTCCTGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACGGTCTTCGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCATAAAAGATTCCCTGTGGGTCCCATCGCCAACGTCCCCTATTTCAGAAAGGTCGCTGCTGCTCACCAGCTTCACCATTCAGACAAGTTCAACGGTGTGCCATATGGGCTGTTTTTGGGTCCGAAGGAATTAGAGGAAGTGGGAGGCCTAGAAGAATTGGAGAAGGAAATCAACAGAAGAATAAAATTGACGGCCCCAAAATCAAACCATGGTTCTTCATCAACCAATATTATGTGA 951 49.21 MAAGLSAALVPKPLHLFLTSSHLSPKPRTPFLFPPPVFRNSRFQWKMRRKTLFTVCVLVEDQNSSGEVENLSDEGSPIVIPQIPSPHVSERLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHSSLWHMHESHHKPREGPFELNDVFAIVNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEINRRIKLTAPKSNHGSSSTNIM 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8600835 8603641 - CmPI595203_05g009410.1 Cmu05g0941 415855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0941 316 Pfam Fatty acid hydroxylase 149 277 IPR006694 GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro)
Cmu05g0941 316 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 6 302 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0231 Cmu-Chr1:2291909 Cmu05g0941 Cmu-Chr5:8600835 2.40E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0941 K15746 - csv:101212140 584.719