Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0974 ATGGCCATCGCTGTGCTCGATGCCCTCGACAACGCTCGTACACAATGGTACCATATTACGGCTATAGTCATAGCCGGGATGGGATTCTTTACGGACGCCTATGATCTTTTTTGCATCTCGACCGTGTCGAAGCTTCTTGGTCGACTTTATTACTTTGATCCAGATAGTAGTAAGCCTGGAAAACTTCCGAACCCCGTCAACAACGCCGTCGTTGGAGTTGCGCTAGTCGGAACCCTAATGGGGCAGCTTTTCTTTGGGTGGTTGGGTGATAAACTTGGAAGGAAGAAAGTTTATGGTGTTACCCTTATTCTTATGGCCTTTTGTGCCATTTGCTCAGGGCTTTCTTTTGGGTCAACATCAAAATCAGTGATAGGTACACTTTGTTTCTTTAGATTTTGGCTTGGATTTGGCATTGGGGGCGACTACCCACTTTCAGCCACCATCATGTCGGAATATGCCAACAAAAAGACTCGAGGAGCTTTCATTGCGGCTGTCTTTGCCATGCAGGGTGTGGGGCTAATATTTGCAGGGCTAGTATCAATGATCCTATCAAAAATCTTCCTGACCCTTCATGATGCTCCCATTTACAAACACGACCCTGTATTTTCCACACAACCTCAAGGAGATTTCCTATGGAGAATTGTGCTAATGCTTGGTGCTTTACCAGCCATTTTAACTTACTATTGGAGAATGAAAATGCCTGAAACAGGACGTTACACTGCCCTTATTGAAGGCAATGCCAAACAAGCTGCTGCAGATATGGGAAAAGTTTTAGAGATCACAATTCAAGCTGAGCAAGACAAACTTGCCAATTTCAAATCAGCCAATGAATATGGTTTGTTGTCTAAAGAATTCTTTCATCGCCATGGACTCCATTTGATTGGAACTACCACTACTTGGTTCTTGTTGGACATTGCATTTTATAGCAATAACCTTACTCAAAAAGACATATTCCCAGCTATGAATTTGACCAAACAGCCGGATGCAGTTAATGCATTGGAAGAAGTTTATGAAACTTCTAAAGCTATGTTCCTTGTTGCCTTACTTGGAACTTTCCCTGGATATTGGTTCACTGTTTTCCTCATTGAGAAGCTTGGAAGGTTCAAAATCCAATTGATTGGATTCTTCATGATGTCAGTTTTCATGGCCGTCCTCGGCGTTCGTTACAATTACTTGAAGCACCATCCCGCCGAGTTCGCCGTGCTTTATGGCCTGACATTCTTCTTTGCCAACTTTGGTCCTAATAGCACCACCTTTGTCCTCCCTGCAGAGCTCTTCCCGACTAGGGTCCGATCGACATGTCATGCGCTAAGTGCTGCATCCGGGAAGGCCGGTGCGATCGTTGGAGCTTTCGGGGTGCAAAATTATACACTAGATGGAAACCCTAGTAAGATTCAAAAGGCTATGATTTTCTTGGCCTTCACTAACATGCTAGGGTTTGTGTTTACATTCTTGGTGACGGAGACTAAAGGGCGGTCGTTGGAGGAGATCTCCGGCGAGGACGGGCGCGCAGGTGATAATGAAAGTCAAATGCCAGTTAGATCGATGGGAAAGCCAGGAGGGCTATGCTTCCGCAAGGAGGTTTTTACGATGGTGGCATTAGTTGTTCATGCAATGACTGCCTCTGCTTCCCCTTCAACTCGGTGGGTTTCGCAGCCTAGGGATTCATTGGCGCTATCTTATGATGCAGCTTGGTTGAGGGAGCCTTGCAAATGTTGGTCTTGGGTAGTCGTAATGCCTAGGGCTCTCCCAGTTTTTGCCTTGGAGTTACTAGCTATAGTAGAGGGGCTCCGATTGTTTAATGCGAATCCTTTTCATGTATTGGTGGTGGAGGCAAACTTGCTTAACATTATCCAAATCTTGAATCATGAAGAGGTTAACCTTATAGAGGTAGTTTCAATTTCTATGGAGGTATAA 1917 44.97 MAIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPDSSKPGKLPNPVNNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLILMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLIFAGLVSMILSKIFLTLHDAPIYKHDPVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEITIQAEQDKLANFKSANEYGLLSKEFFHRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKQPDAVNALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSVFMAVLGVRYNYLKHHPAEFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGRAGDNESQMPVRSMGKPGGLCFRKEVFTMVALVVHAMTASASPSTRWVSQPRDSLALSYDAAWLREPCKCWSWVVVMPRALPVFALELLAIVEGLRLFNANPFHVLVVEANLLNIIQILNHEEVNLIEVVSISMEV 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8887985 8891805 - CmPI595203_05g009740.1 Cmu05g0974 415888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0974 638 Pfam Sugar (and other) transporter 23 498 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu05g0974 638 NCBIfam phosphate:H+ symporter 6 500 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cmu05g0974 638 FunFam Inorganic phosphate transporter 1-6 17 511 - -
Cmu05g0974 638 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
Cmu05g0974 638 Gene3D MFS general substrate transporter like domains 17 514 IPR036259 -
Cmu05g0974 638 CDD MFS_PhT 22 490 - -
Cmu05g0974 638 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857(InterPro)
Cmu05g0974 638 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 496 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0974 Cmu-Chr5:8887985 Cmu07g0175 Cmu-Chr7:1720917 3.60E-180 dispersed
Cmu05g0974 Cmu-Chr5:8887985 Cmu06g0688 Cmu-Chr6:7997819 3.80E-182 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0974 K08176 - csv:101210631 948.732