Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g0984 ATGTATCCAAACTCCATCCCATCGATCGATATCGATGATGGGCTAAGCCACCATTTTCTCTCTCTTTCCTCATATTTCTCTCTCCCTCTCTCTTGTTTATCTCCTTTTTCTTTTCCTCTGGTACTCTATTCTGTCCCGATTCTTCCATTTTCTACCCTGACTGTTGGCTTAGATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGACAACAAGTCTCATGATGATGGTAGATACGGGTGCATCGGAAAATCGTGGGCCGGTTGTTGATAAGCATCCAGAGAAAGATGAAGATGGTGGCTATACAAGTGGAGGGTGGAAAAGTGAAGATGGGAAACTTAGTTGGGGGTATTCAAGTTTCAGAGGGAAGAGGGCAACCATGGAAGATTTCTTTGATATTAAAATGTCGAAGGTCGATGGTCAAACCGTCTGCCTTTTTGGCATCTTTGATGGTCACGGTGGATCACGAGCTGCAGAGTTTTTGAAGGACCATCTCTTTGAGAATCTGATGAAGCACCCAAAATTTTTGATGGATACCAAATTAGCTATCAGTGAAACATATCAACAGACGGATGCTGAATTTTTAAATTCGGAAAAGGATACTTTAAGGGACGATGGCTCTACTGCTTCAACAGCTTTGCTGGTTGGCAATCATCTCTATGTTGCCAATGTTGGAGATTCACGTACTATTATATCAAAGGGGGGTGAAGCGATCCCTCTTTCCGAGGACCATAAACCAAACAGAACTGACGAGCGGAGGAGAATTGAAAATGCTGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGAGTGTTAGCAATGTCCCGTGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTGGCGGATCCTGATATTCAGGATCTTGAAGTAGACAAGGACATCGAGTTGCTTGTTCTCGCAAGTGATGGACTTTGGGACGTGGTACGCAACGAGGATGCAGTATTAGTTGCAGGGAAGGAAGATGAACCAGAGGCAGCTGCTCGGAAGCTAACTGAAGCAGCGTTTACCCGTGGTAGCGCTGACAATATAACATGCATTGTGGTGAAGTTTCATCATGACAATGCAGGTCCTGCTGCAGATACTCGAGAAAACAACTAA 1137 44.85 MYPNSIPSIDIDDGLSHHFLSLSSYFSLPLSCLSPFSFPLVLYSVPILPFSTLTVGLDGMQLQYKECDCSGWTTSLMMMVDTGASENRGPVVDKHPEKDEDGGYTSGGWKSEDGKLSWGYSSFRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLMDTKLAISETYQQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDIELLVLASDGLWDVVRNEDAVLVAGKEDEPEAAARKLTEAAFTRGSADNITCIVVKFHHDNAGPAADTRENN 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9005640 9011579 - CmPI595203_05g009840.1 Cmu05g0984 415898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g0984 378 CDD PP2Cc 119 363 IPR001932 -
Cmu05g0984 378 MobiDBLite consensus disorder prediction 88 106 - -
Cmu05g0984 378 PANTHER PROTEIN PHOSPHATASE 105 362 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu05g0984 378 FunFam Probable protein phosphatase 2C 76 109 369 - -
Cmu05g0984 378 MobiDBLite consensus disorder prediction 87 106 - -
Cmu05g0984 378 SUPERFAMILY PP2C-like 113 364 IPR036457 -
Cmu05g0984 378 Gene3D - 109 368 IPR036457 -
Cmu05g0984 378 SMART PP2C_4 107 361 IPR001932 -
Cmu05g0984 378 Pfam Protein phosphatase 2C 121 356 IPR001932 -
Cmu05g0984 378 ProSiteProfiles PPM-type phosphatase domain profile. 117 363 IPR001932 -
Cmu05g0984 378 SMART PP2C_SIG_2 115 363 IPR001932 -
Cmu05g0984 378 ProSitePatterns PPM-type phosphatase domain signature. 148 156 IPR000222 GO:0043169(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0984 Cmu-Chr5:9005640 Cmu05g1641 Cmu-Chr5:26357131 6.70E-94 dispersed
Cmu05g0984 Cmu-Chr5:9005640 Cmu05g0992 Cmu-Chr5:9096777 7.10E-35 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g0984 K17506 - csv:101203681 598.971