Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1138 ATGGGTAGCATTGAAACAGACAGAACTGTAACAGGATTCGCCGCCAAAGACCCATCTGGGATTCTCTCTCCTTACACTTACACTCTCAGAAACACCGGCCCCCAAGATGTTTTCATCAAAGTCATTTGCTGTGGAATCTGCCACTCTGATCTTCACCAAATCAAGAATGAACTCGGCATGTCCAATTACCCCATGGTTCCTGGACACGAGGTGGTCGGGGAAGTGGTGGAGGTTGGATCCGAAGTGGATCGATTCAGAGTTGGGGAGATGGTCGGAGTTGGGTGTATTCTTGGATCATGTTCCAGTTGTAATCCTTGTAATTCCGATAAGGAGCAGTACTGTAACAAGAGAATCTGGACCTATAACGACGTGTATCACGACGGCCGCCCCACCCAAGGCGGTTTCTCCTCCGCCATGGTTGTCCACCAAAAGTTTGTGGTGAGAATCCCAGATGGGATGTCGCCGGAGCAGGCGGCGCCGCTTCTTTGCGCGGGAGTGACGGTGTATAGCCCGCTAAGTCACTTTGGACTGAAACAGAGTGGGCTAAGAGGCGGAATTTTGGGGCTGGGTGGCGTTGGGCATATGGGTGTCAAAGTGGCAAAAGCTTTGGGCCACCACGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGGAGGAGGCTCTGGAACATCTCGGTGCCGACGAGTACTTGGTCAGCTCCGACAACACTCAAATGGAACGAGCCATTGACTCGCTCGATTACATTATCGACACCGTCCCTGTTTTTCATCCGCTCGAGCCGTATCTCTCACTGCTAAAACTCGACGGAAAATTGATTTTGATGGGTGTCATTAATACCCCATTGCAATTCGTTTCCCCTCTCCTTATGCTGGGGAGGAAGACGATTACAGGGAGCTTCATCGGAAGCATGACAGAGACACAAGAAGTATTGGATTTTTTTAAAGAGAAGGAGCTGAGCTCCATGATTGAAGTGATAAAGCTTGATTACATAAACAAGGCTTTCGAGAGGTTGGAGAAGAACGATGTTAGATACAGGTTCGTTGTCGACATTGCCGGAAGTAAGATGCCTCAGTGA 1074 49.72 MGSIETDRTVTGFAAKDPSGILSPYTYTLRNTGPQDVFIKVICCGICHSDLHQIKNELGMSNYPMVPGHEVVGEVVEVGSEVDRFRVGEMVGVGCILGSCSSCNPCNSDKEQYCNKRIWTYNDVYHDGRPTQGGFSSAMVVHQKFVVRIPDGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKREEALEHLGADEYLVSSDNTQMERAIDSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVSPLLMLGRKTITGSFIGSMTETQEVLDFFKEKELSSMIEVIKLDYINKAFERLEKNDVRYRFVVDIAGSKMPQ 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10827768 10829246 - CmPI595203_05g011380.1 Cmu05g1138 416052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1138 357 Gene3D - 13 350 - -
Cmu05g1138 357 SUPERFAMILY GroES-like 17 181 IPR011032 -
Cmu05g1138 357 Gene3D - 164 320 - -
Cmu05g1138 357 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Cmu05g1138 357 FunFam probable cinnamyl alcohol dehydrogenase 13 170 - -
Cmu05g1138 357 PANTHER ALDEHYDE REDUCTASE 9 351 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cmu05g1138 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
Cmu05g1138 357 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
Cmu05g1138 357 Pfam Alcohol dehydrogenase GroES-like domain 33 151 IPR013154 -
Cmu05g1138 357 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Cmu05g1138 357 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cmu05g1138 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cmu05g1138 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0123 Cmu-Chr1:1105489 Cmu05g1138 Cmu-Chr5:10827768 3.50E-84 transposed
Cmu01g1770 Cmu-Chr1:31418762 Cmu05g1138 Cmu-Chr5:10827768 4.60E-108 transposed
Cmu05g1594 Cmu-Chr5:25588395 Cmu05g1138 Cmu-Chr5:10827768 1.30E-99 transposed
Cmu05g2583 Cmu-Chr5:34548954 Cmu05g1138 Cmu-Chr5:10827768 2.80E-07 transposed
Cmu09g1818 Cmu-Chr9:34342540 Cmu05g1138 Cmu-Chr5:10827768 5.10E-10 transposed
Cmu02g0670 Cmu-Chr2:6730979 Cmu05g1138 Cmu-Chr5:10827768 2.60E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1138 K00083 - csv:101222395 642.499