Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1326 ATGGAGCAAGGATCTGGGATTTCCACTCCTTCCCATCCTTCTCAGCTCTCGCGGGCATGGCTTACAAGGAATATAATACTTGCATACCAAAGTTTTGGAGTAGTGTATGGAGATTTGAGCACTTCACCCCTCTACGTTTACTCAAGTACATTTGCGGGGAAGTTGCAGAAACATCGAACTGAGGAAGTAGTATTTGGTGCATTCTCCTTGATCTTCTGGACTTTTACTCTGATACCATTACTAAAGTATGTTTTCATTGTATTGAGCGCAGATGACAATGGTGAAGGAGGAACCTTTGCTCTTTACTCCCTGCTCTGCCGACATGCTAAGTTGAGTTTACTTCCCAACCAACAAGCAGCTGATGAGGAGCTCTCAGCATACAGATATGGTCCATCTTCTCATGCAGTAGCCCCTTGTCAACTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACGATCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGAGTGCTAACTCCTGCAATTTCAGTTCTATCCTCAGTTTCAGGTTTACAAGTTACTGAAGCAAAATTGACCAACGGGACACTCCTTTTGATTGCTTGTGCCATATTGGTTGGTCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCATTTATGTTTGCTCCAATAGTTATCATCTGGTTGTTGTCAATTTTCTCCATTGGTCTGTACAACATAATACATTGGAACCCAAGTATTATTCGTGCAATTTCCCCTCATTATGTTATCAAGTTCTTACAAATCACTGGTAAAGATGGTTGGCTTTCTCTCGGAGGGGTTCTTCTGGCCATAACTGGTACTGAGGCGATGTTTGCAGATCTTGGTCATTTCACGGCTTTGTCAATAAGGATTGCATTTGCGTTTGTTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCCTTTCTGTCTAAGAACCTTGATTTGTTTCCAAACAGTTTTTATGACTCGATACCTGATCCTGTATTTTGGCCTGTTTTTGTTATTGCCACCCTTGCAGCTATTGTGGGGAGCCAGGCTGTCATTACTGCTACTTTCTCTATTGTCAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTAAAAGTTGTCCACACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATAAACTGGATATTAATGATCCTCACTCTTTCCATTACAATAGGGTTTCAAGATACGACACTGATCGGAAATGCTTATGGACTCGCCTGCATGACAGTTATGTTCATAACAACATTTCTTATGGCACTTGTCATAGTATTCGTTTGGCAAAAAAGTATCCTGCTAGCCGCACCTTTTCTCATCTTCTTCTGGTCTGTCGAGGGTGCCTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGGTGGGTCCCGCTTGTGCTATCAGCCTTTTTTATGATAGTTATGTTTGTCTGGCACTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAAGTTTCACTGAAGTGGTTGCTTGGACTAGGCCCTAGCCTTGGTATAGTTCGTGTCCCTGGGATTGGCCTCATATACTCGGAATTGGCGACAGGAGTACCCGCAATATTTTCTCACTTTGTGACAAATCTCCCTGCATTTCACAAGGTTTTAGTGTTTGTTTGTGTAAAGTCTGTTCCAGTTCCATATGTCTCTCCCGAAGAACGTTTTCTGATTGGGAGAGTCTGTCCTAGACCATATCGCATGTATCGGTGCATAGTGAGATATGGCTACAAGGACATTCAGAAGGATGATGGGGACTTTGAGAACCAACTGATACTAAACATTGCAGAATTCATTCAAATGGAGGCAGAGGAACCACAATTCTCAAGCTCTGAAAGTTCTTCAGTTGATGGGAGGATGGCAGTAATAAGCACTCGGAGTATACAATCAAGCTTGAGTTTAATAGTGTCAGGGCATGAAGAAATCGGTACCAGCAACTCCATCTATAGCAGCAAATCTGCCACACTCCAAAGTTTACGATCTGTGTATGAGGATGAGAATCCACAACTAAGAAGGCGCCAAGTGAGGTTTCAGCTATCTCCCAGCCCTTCAATGGACCCTAGAGTTAGGGAAGAATTAATAGACTTGATCCAAGCCAAAGAAGCGGGTGTAGCATATATAATGGGGCACTCATATGTGAAGGCCAGAAGATCTTCATCGTATTTGAAGAAGCTTGTGATAGATATCGGATACTCGTTCCTCCGAAAGAACTGCAGAGGCCCGTCTGTTGCGCTCAATATCCCTCACATCAGTCTAATTGAAAGACGCTCTGGTGATGGCATCTGCAGGCTGTTGGCAGCAGAGGGTGACACAACACAACAGCATGATATTCAGATCTGTGGGGTAGCATCTGATCTGAAATTGGCTGTAGGCATGGGTAGGTGCTTCTTCTCACTTGCAATGCAAACAGGAAAAGGTTTTGGAGTTGGACATCCCTTTTTTACATCTTCTGTAATCTACTTGTAG 2535 43.08 MEQGSGISTPSHPSQLSRAWLTRNIILAYQSFGVVYGDLSTSPLYVYSSTFAGKLQKHRTEEVVFGAFSLIFWTFTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYRYGPSSHAVAPCQLKRFLERHKTLRTILLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTEAKLTNGTLLLIACAILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIHWNPSIIRAISPHYVIKFLQITGKDGWLSLGGVLLAITGTEAMFADLGHFTALSIRIAFAFVIYPCLVVQYMGQAAFLSKNLDLFPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLSITIGFQDTTLIGNAYGLACMTVMFITTFLMALVIVFVWQKSILLAAPFLIFFWSVEGAYLSAAIIKVPQGGWVPLVLSAFFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSSSESSSVDGRMAVISTRSIQSSLSLIVSGHEEIGTSNSIYSSKSATLQSLRSVYEDENPQLRRRQVRFQLSPSPSMDPRVREELIDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIERRSGDGICRLLAAEGDTTQQHDIQICGVASDLKLAVGMGRCFFSLAMQTGKGFGVGHPFFTSSVIYL 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15268686 15276141 - CmPI595203_05g013260.1 Cmu05g1326 416240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1326 844 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 777 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu05g1326 844 Pfam K+ potassium transporter C-terminal domain 529 777 IPR053952 -
Cmu05g1326 844 NCBIfam potassium uptake protein 27 777 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu05g1326 844 Pfam K+ potassium transporter integral membrane domain 27 516 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0683 Cmu-Chr3:1005572 Cmu05g1326 Cmu-Chr5:15268686 2.30E-234 dispersed
Cmu03g1028 Cmu-Chr3:4835668 Cmu05g1326 Cmu-Chr5:15268686 6.30E-203 dispersed
Cmu03g1029 Cmu-Chr3:4845333 Cmu05g1326 Cmu-Chr5:15268686 2.90E-204 dispersed
Cmu05g1326 Cmu-Chr5:15268686 Cmu09g1813 Cmu-Chr9:34286718 1.10E-248 dispersed
Cmu05g1326 Cmu-Chr5:15268686 Cmu10g2199 Cmu-Chr10:28068846 2.50E-250 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1326 K03549 - csv:101208973 1487.63