Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1349 ATGGCCATCTCTGAAACTCAGTTCCCTTCTTCTCTCATCCCTAATTTCCTCTACTCCTCTTCTGCCATTCCATTCCACAAGATTCTCCGCTCCAATCTTCCTTCTGAATCGCCATCTCCGAGCCTCGAATCCTCCACTTCGATGAAGGCCTTCGCGGTTCCTTCTCCCACTGAACCGAGCAAGAAATTGGAGATGTATTCGCCGGCTTTCTACGCCGCCTGTGCCGTCGGTGGAAGCCTCAGCTGCGGTCTCACTCACATGACCGTCACTCCGCTCGATCTCGTCAAGTGTAATATGCAGATTGACCCGGTGAAATACAAGAGCATTTCATCTGGTTTTGGAATTTTGCTAAAGGAGCAAGGAATCAGGGGGCTGTTTAGGGGTTGGGCGCCAACTCTACTAGGTTACAGTGCTCAGGGTGCTTGCAAGTACGGCATCTACGAATTCTTTAAGAAATACTATTCCGATATAGTCGGTCCTGAGTATGCAGCAAAGTACAAGACATTGATCTATCTTGCTGGTTCTGCGTCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCCTTTGAAGCTGTTAAAGTTAGAGTTCAGACACAGCCAGGTTTTGCCAGAGGTTTGTCAGATGGCCTTCCCAAATTTGTTAGATCGGAAGGTGCTCTTGGGTTGTATAAGGGTATTGTTCCTCTGTGGGGACGTCAAATCCCATATACAATGATGAAGTTTGCAACATTTGAGAACCTGGTGGAACTCATATACAAGCATGTCATCCCCAAGCCAAAGAACGAATGCAGCAGCCCCTTGCAACTCGGCGTCAGCTTTGCTGGTGGATATATTGCCGGTGTTTCTTGTGCTATAGTTTCTCATCCTGCGGATAATCTTGTCTCCTTTCTCAATAATGCTAAAGGGGCTACCGTTGGTGAGGCAGTTCAGAAGCTTGGATTATGGGGTCTCTTCACACGAGGGCTGCCTCTACGCATAGTGATGATTGGAACCCTCACTGGAGCTCAGTGGGTTATCTATGACGCATTCAAAGTTTCTGTGGGATTGCCAACTACCGGTGGGGTTGCCCCTCCCATTGCTGCATCCCCAGAACATACACATACAACTGCGAGTGCGTAG 1119 48.53 MAISETQFPSSLIPNFLYSSSAIPFHKILRSNLPSESPSPSLESSTSMKAFAVPSPTEPSKKLEMYSPAFYAACAVGGSLSCGLTHMTVTPLDLVKCNMQIDPVKYKSISSGFGILLKEQGIRGLFRGWAPTLLGYSAQGACKYGIYEFFKKYYSDIVGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHVIPKPKNECSSPLQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGEAVQKLGLWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVSVGLPTTGGVAPPIAASPEHTHTTASA 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 16581192 16586349 + CmPI595203_05g013490.1 Cmu05g1349 416263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1349 372 Gene3D Mitochondrial carrier domain 70 346 IPR023395 -
Cmu05g1349 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 49 356 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Cmu05g1349 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 153 IPR018108 -
Cmu05g1349 372 Pfam Mitochondrial carrier protein 167 254 IPR018108 -
Cmu05g1349 372 Pfam Mitochondrial carrier protein 71 155 IPR018108 -
Cmu05g1349 372 SUPERFAMILY Mitochondrial carrier 71 342 IPR023395 -
Cmu05g1349 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 166 250 IPR018108 -
Cmu05g1349 372 FunFam Phosphate carrier protein, mitochondrial 69 347 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0747 Cmu-Chr1:8409654 Cmu05g1349 Cmu-Chr5:16581192 3.80E-166 dispersed
Cmu02g0335 Cmu-Chr2:3078105 Cmu05g1349 Cmu-Chr5:16581192 2.70E-85 dispersed
Cmu05g1349 Cmu-Chr5:16581192 Cmu06g1868 Cmu-Chr6:29460902 2.20E-150 dispersed
Cmu05g1349 Cmu-Chr5:16581192 Cmu05g2141 Cmu-Chr5:30877080 1.50E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1349 K15102 - csv:101203018 657.521