Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1385 ATGGGAAGGCGATCCTTATGGGTTGCACTTCTTGTCTTTTCTCTTCTTCTTTCTCTGCGACCCCACACAGTTTCTTCCACTCTTCCTCTTCAATCATTGATTCAGGGTTCTAAAGATTCTGCCATTGAAAGTACTCCAGAGCAGGATTGGAACAATGCTCATGAGGTACATTGCTCAAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGGAAAAAAAGAAATACAAGATTTCTACTAAGTGTAGACTTCACCCTGATAATGATATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTACGAAGAAAAGTATCTCGATCAGCACTTTGACAATAGACACTATAATTTGCTCAATGTGAGTCGAAGCAGGTGCTTGGCAGATCTTTGTGGTGCATTGCACTGCGACCATGTGATAGATACAGTATCACCGAAAAGTAAATGCAATCCTGCTGCTGCCGCAAGAAATAAACATATGTGTGAGGGTCTTGCGGACAGCTGTTTTCCGGTTGATGAGGGTGCTTCGGCCAGCCATCTTCACGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGCTAGGACGAGTGCGTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTTGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGGGAATGAGAACTCGACCACAGGTACTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCATAG 840 42.74 MGRRSLWVALLVFSLLLSLRPHTVSSTLPLQSLIQGSKDSAIESTPEQDWNNAHEVHCSRERSRAAWKIIEEYLMPFVEKKKYKISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNVSRSRCLADLCGALHCDHVIDTVSPKSKCNPAAAARNKHMCEGLADSCFPVDEGASASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17598750 17601461 + CmPI595203_05g013850.1 Cmu05g1385 416299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1385 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Cmu05g1385 279 PANTHER ZINC FINGER PROTEIN-RELATED 12 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1385 Cmu-Chr5:17598750 Cmu06g1810 Cmu-Chr6:29005680 1.10E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1385 - - - 0.0