Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1416 ATGGGTATCATCATCTCTCTCTTCTCCATTTCTATTTTCATTGTCTTCCTCTTCAGATTCCGACCACCCGCCGGCGACTTTTCTACCCACTCTTCCCCGCCGACGTACCCTCTCATCGGCTGTCTCCTCTCCTTCTACATTAACCGCAACCGCCTCTTGGATTGGTACACTCAGCTCTTGTCGGAATCCGCCACCGGCACTATCGTCGTCCACCGCCTCGGCTGCAGGCGTACGGTGGTGACGGTGAACCCGGTTAACGTGGAGTATATTTTGACGACCCATTTCCTTAATTTCCCTAAAGGGAAGCCTTTCACTGAAATCTTGGGTGACTTTCTTGGCTGCGGTATTTTCAACGTCGACGGCGACCAGTGGCGGACGCAGCGGAAGCTGGCTAGTCACGAGTTTAGCGCCAAGTCTCTTCAGGAATTTGTCGTGAAGACGTTGAAGTCGGAGGTGGAGACGCGGTTGTTGCCCGCCCTCGAGGCATCGGCCGACGATGCTGCTGTCGTGGACTTGCAGAAATTACTAAGAGGATTTGCATTCCGTGTGATATGTAAGATTGTTTTGGGGGGTGAAGAAGAGACAATTTTCGCACTTGAAAAGAGCTTTGGCATAGCGTCGGAGGTGAGCGCCAGGCGAGCGATGGAGCCAGTTTACGCGATATGGAAAATGAAGAGATGGTTTGGGGTTGGATCGGAGCGGCGGCTGAAGACAGCGGTGGCGGAGGTTCACCGGAATGTGATGAACATAATTGACAAAAGAAGGAGGAAGAAGAAGATGGAGGACATCCATGACAGCGAAGATCTCTTGTCCAGGTTGATCTCAATCGGGCATGACGATCAGATGATCCGAGACATGGCCATAAGTTTCATCATGGCAGGTCGAGACACGACATCAGCTGCAATGACATGGCTGTTTTGGCTACTCTCCCATCATCCCAACATAGAGAATCAATTAGTAGAAGAGATAGACTTGGAATCTGAAAAAAAATTGAACTACCAATCTCTGAAGGAGCTCAAATTTCTCAAGGCATGTCTCTGTGAAACCATGAGAATGTATCCACCAGTCCCATGGGATTCCAAGCATGCCATTGCCGACGACTACTTGCCCGACGGGACTCTAGTCCGATCTGGAGATAGAGTGACATATTTCCCCTATGGGATGGGTAGAATGGAGGGTTTGTGGGGGAAGGACCAGTTCGAGTTCAAGCCGAGCCGATGGCTCCTTGAACAAGACGGGCGTGGCAGCCGGAGAAGAGGGGTGAAATTGGTTAGTCCATACAAGTTTCCAATATTTCAAGCTGGGCCAAGGGTGTGTTTGGGGAAGGAGATGGCTTTCCTTCAGATGAAGTATGCGGTGGCTTCAATTCTCAGCCAATTCAGAATCAAACCTATTGCCGGCGACCGCCCTGTGTTTATGCCGCTGTTGACGGCGCATATGGCTGGCGGCTTCAAGGTTTTGATTCAAAGGAGAGAGAAAGAGGGCAGAGAAAGAGGCAATTCAACACAAACAAACAAAGTTCCTAATTTAAACAATCAGAAGAAGAGTTGA 1551 50.03 MGIIISLFSISIFIVFLFRFRPPAGDFSTHSSPPTYPLIGCLLSFYINRNRLLDWYTQLLSESATGTIVVHRLGCRRTVVTVNPVNVEYILTTHFLNFPKGKPFTEILGDFLGCGIFNVDGDQWRTQRKLASHEFSAKSLQEFVVKTLKSEVETRLLPALEASADDAAVVDLQKLLRGFAFRVICKIVLGGEEETIFALEKSFGIASEVSARRAMEPVYAIWKMKRWFGVGSERRLKTAVAEVHRNVMNIIDKRRRKKKMEDIHDSEDLLSRLISIGHDDQMIRDMAISFIMAGRDTTSAAMTWLFWLLSHHPNIENQLVEEIDLESEKKLNYQSLKELKFLKACLCETMRMYPPVPWDSKHAIADDYLPDGTLVRSGDRVTYFPYGMGRMEGLWGKDQFEFKPSRWLLEQDGRGSRRRGVKLVSPYKFPIFQAGPRVCLGKEMAFLQMKYAVASILSQFRIKPIAGDRPVFMPLLTAHMAGGFKVLIQRREKEGRERGNSTQTNKVPNLNNQKKS 516
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 18365936 18370236 - CmPI595203_05g014160.1 Cmu05g1416 416330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1416 516 Gene3D Cytochrome P450 28 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 Pfam Cytochrome P450 32 470 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 MobiDBLite consensus disorder prediction 501 516 - -
Cmu05g1416 516 CDD CYP86A 88 484 - -
Cmu05g1416 516 MobiDBLite consensus disorder prediction 492 516 - -
Cmu05g1416 516 SUPERFAMILY Cytochrome P450 31 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1416 516 PANTHER CYTOCHROME P450 17 484 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1416 Cmu-Chr5:18365936 Cmu07g0133 Cmu-Chr7:1218816 4.10E-118 dispersed
Cmu05g1416 Cmu-Chr5:18365936 Cmu06g1825 Cmu-Chr6:29180453 2.50E-160 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1416 K20665 - csv:101207598 857.44