Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1512 ATGATCTCTGCTGTGAAACAGTCTTCTAGGGGTATCCATTGCTCTGATGGTATTATTAGGAGCAAAATCTCGGTTCCCTCTCAGCGATCCTCGTTTCTTCCACCTCTTCCGGTGCAAAAACCTCCAAACTCCGCTGTTTCTTTTCATAAGGCTGTACATGTTTCTTCGCTTGAGAATTTTGGATCACTTCGGGTTCGTAAAGCTAATCTGATAAAATGTGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGAATCGAGCATTGAGTTGCCGAAAAGTCAGGTCCCTTCTGAGGCCGCGAAGAAGGTGAAAATTGGATCCTACTTCGCTCTTTGGTGGGCTTTGAACGTGGTTTTCAATATCTATAACAAGAAGGTGTTGAACGCTTACCCATATCCATGGCTGACATCGACTCTGTCGCTTGCCGCTGGATCTCTGATCATGTTGATCTCATGGATGACGAGAATTGCCGAGGCTCCCAAAACTGACTTCGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACCGTGAGCATGTCCAAGGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGCGTATTGGTTTCAAGGTTCTTGTTGGGTGAGACCTTCCCACTTCCTGTTTACTTGTCGCTCCTCCCGATCATCGGTGGGTGTGCTCTCGCTGCTGTGACCGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATATTTTCGAAGAGAGGCATGAAAGGAAAATCTGTTAGCGGGATGAACTACTATGCATGTTTATCAATTTTGTCTTTGTTACTCTTGACGCCATTTGCATTTGCTGTGGAGGGACCAGAATTGTGGGCTGCTGGATGGCAAACAGCAGTTTCTCAAATTGGACCTCATTTCGTTTGGTGGGTTGCAGCACAAAGTATATTCTACCATCTCTATAATCAGGTGTCTTACATGTCCTTGGATGAGATTTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCAGTCATAGTTTCTTCCATCATCATCTTCCGAACACCTGTGCAGCCAGTCAACGCTCTCGGAGCTGCCATTGCAGTTCTTGGAACCTTCATATATTCTCAGGCAAAGCAATGA 1191 45.34 MISAVKQSSRGIHCSDGIIRSKISVPSQRSSFLPPLPVQKPPNSAVSFHKAVHVSSLENFGSLRVRKANLIKCEAYEAERSQPIESSIELPKSQVPSEAAKKVKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLLLTPFAFAVEGPELWAAGWQTAVSQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23003661 23006692 - CmPI595203_05g015120.1 Cmu05g1512 416426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1512 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Cmu05g1512 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu05g1512 396 PANTHER SOLUTE CARRIER FAMILY 35 98 395 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Cmu05g1512 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2155 Cmu-Chr1:34178698 Cmu05g1512 Cmu-Chr5:23003661 1.00E-153 dispersed
Cmu05g0268 Cmu-Chr5:2302370 Cmu05g1512 Cmu-Chr5:23003661 5.70E-86 dispersed
Cmu05g1512 Cmu-Chr5:23003661 Cmu05g2428 Cmu-Chr5:33382384 5.40E-62 dispersed
Cmu10g1364 Cmu-Chr10:6606077 Cmu05g1512 Cmu-Chr5:23003661 1.70E-185 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1512 K15283 - csv:101220046 723.391