Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1523 ATGCGATGTTTGATTTTTCACACACCCTTTTGGTTGTTTTTTGTGTTGGTGTCCAATTTCAAGCTCTGTTTTTCACAAGATTACACCATTGGCGACTCTCTGCCTGCGGCGGCGGCGCCGCCGCAGCAAAATGAATGTAATGGGATTTTCTTAACCTACACGTTCTTTTCAAGGGAAAAAGAATTTCCCCATGTGAAGAATGTTTCTGCTCAGGCTTGGGCGTTCAGAGCTCAGGCCACCGTGCTGAACGCCGGCGCGACCGAGCTGGACGCTTGGAAGATGTATATTGGGTTTCAACATAGAGAGATTTTAGTGTCGGCGGCTGGTGCGGTGTTGGCGGATGGTTCGGATTTCCCCGCCGCCGTCGGGAAAGGGGTGATCTTAGCTGGATACACACAAACGGACTTGAAAACCGCCATACAAACCGCCGGAGATTATAATCAAATGCAGGTGACAATTGATATCACCGGAACCCAATTCGGCGTGAAGAAGAATGGAACTCCGATGCCGAAGACAATTCGCCTTGAAAATGAAGGCTTCAAGTGTCCGCCGCCTCGTCGTCATCGCAACAAAAGTTATATGCATGTTTGCTGCAAGAAAGACCCAAAATTGAAGCAAAAAGCACCAAAGAAGACCAAGTTTTTAGGTCGACAAAACGGCGATCTCTCGCTCACCTACGACGTCATCCAAGCTTATGGGAATAACTATCTTGCACAAGTCAGCATTGACAACAACAACCCTCTTGGCCGCCTCGACCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTTCCACCATGAGAGGAGCTTACACTCACAAAATTGACTACTCTGACTGCATCTTTGGCCCTCAAGCCCAATACTATCAAGATTTTGACTTCTCCCAAATCATGAATTGTGAGAAGAACCCCATCATCGCCGACCTCCCTTCCGATCGAGCCAACGATTCCAAGGTCGGAAAGTTACCCTTCTGTTGCAACAACGGCACCATCTTACCGCCACTGATGGATCCAAGCAAAGCAAGGTCCATTTTTCAGCTCCAAGTCTATAAGCTTCCCCCTGACTTCAACAGAACAGCCTTGTACCCTCCTCAAAAATGGAAGATCAACGGCATTCTTAACCCCAATTACAAATGTGGAGCTCCTATTAGAGTTGATCCAACACAATTTCCTGACTCAACTGGACTTCAATCCATAACCACAGCCATTGCAAGTTGGCAAGTGGTTTGCAATATTACTACTCCAAAACCCAAACAATCAAGATGTTGTGTTTCTTTCTCTGCTTATTATAATGACTCTGTTATCCCTTGCAATACTTGTGCTTGTGGATGTGATCAAACTCAAACTTGCAACCCAAATTCTTCCCCATTGCTTCTTCCACCAGAGGCCCTTTTAGTTCCATTTGACAATAGAACTCTAAAGGCAAAAGCTTGGGCCAAAATCAAACACTTTCCAATTCCAAAGAAACTCCCTTGTCCTGACAATTGTGGGGTTAGTTTAAATTGGCATATAAACTCAGATTATAACAGTGGTTGGACGGCTAGAATTACCCTTTTCAATTGGGAAGAATACCCTTTTGAGGAATGGTTTGCTGCTGTTCAATTGGATAAAGCTGCTAAAGGCTATGAGAATGTCTACTCTTTCAATGGGACTAAACTCCCACCAGATATGATCAAGAACACCATCTTTTTCCAAGGATTGGAAGGTCTTAATTACCTGATGGGGGAGATGAATGGGACGGACCCGAGATTCGATCCTCGAGTACCGGGAAAGCAACAATCGGTAATCTCTTTCACTAAGAAGAATTTGAGGAACCTCAATATAAAGGAAGGAGATGGATTCCCTTCAAAGGTTTATTTCAATGGAGAAGAATGTGCACTTCCTCCTCATATTCCTTTAGGAAATGGTGCTGCTCACAGCCTCCATGTCAGCTCTGAACCTTTAATGCTGCTGCTCACAGTTATGGCTTTTTTCATTCTCTTCATCGATGGCTTTCATTGA 2007 44.69 MRCLIFHTPFWLFFVLVSNFKLCFSQDYTIGDSLPAAAAPPQQNECNGIFLTYTFFSREKEFPHVKNVSAQAWAFRAQATVLNAGATELDAWKMYIGFQHREILVSAAGAVLADGSDFPAAVGKGVILAGYTQTDLKTAIQTAGDYNQMQVTIDITGTQFGVKKNGTPMPKTIRLENEGFKCPPPRRHRNKSYMHVCCKKDPKLKQKAPKKTKFLGRQNGDLSLTYDVIQAYGNNYLAQVSIDNNNPLGRLDHWNLTWEWMRGEFISTMRGAYTHKIDYSDCIFGPQAQYYQDFDFSQIMNCEKNPIIADLPSDRANDSKVGKLPFCCNNGTILPPLMDPSKARSIFQLQVYKLPPDFNRTALYPPQKWKINGILNPNYKCGAPIRVDPTQFPDSTGLQSITTAIASWQVVCNITTPKPKQSRCCVSFSAYYNDSVIPCNTCACGCDQTQTCNPNSSPLLLPPEALLVPFDNRTLKAKAWAKIKHFPIPKKLPCPDNCGVSLNWHINSDYNSGWTARITLFNWEEYPFEEWFAAVQLDKAAKGYENVYSFNGTKLPPDMIKNTIFFQGLEGLNYLMGEMNGTDPRFDPRVPGKQQSVISFTKKNLRNLNIKEGDGFPSKVYFNGEECALPPHIPLGNGAAHSLHVSSEPLMLLLTVMAFFILFIDGFH 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23392726 23396358 - CmPI595203_05g015230.1 Cmu05g1523 416437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1523 668 Pfam COBRA-like protein 236 415 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cmu05g1523 668 PANTHER COBRA-LIKE PROTEIN 7 11 659 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0704 Cmu-Chr5:6056185 Cmu05g1523 Cmu-Chr5:23392726 6.80E-219 dispersed
Cmu05g1523 Cmu-Chr5:23392726 Cmu06g1601 Cmu-Chr6:27224357 5.60E-35 dispersed
Cmu10g1369 Cmu-Chr10:6686941 Cmu05g1523 Cmu-Chr5:23392726 7.40E-293 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1523 - - - 0.0