Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1594 ATGGCTCAAACCACGCCCAATCACACTCAGACAGTCTCCGGTTGGGCAGCCCATGATTCTTCCGGCAAGATCAGTCCGTATACTTTCAAACGCAGAGAAAACGGCCCCGAGGACGTGACGATAGAGATTTTGTACTGTGGAATATGCCATACCGATATTCACTACGCCAAAAACGAGTGGGGCATCACCATGTATCCTGTAGTTCCCGGGCATGAGATGACAGGGGTAATCACGAAAGTGGGAAGCAACGTGGAGAAGTTCAAAATAGGGGACAGAGTGGGGGTTGGTTGTATAGCTGCTTCCTGTTTGAACTGCGAGTTTTGTCAAGATTCCCAAGAAAACTACTGTGAGAATTTGCAGTTTACATACAACGGAATCTTCTGGGATGGGAGCATAACTTACGGGGGATACTCCAAAATGTTTGTTTCAGATCAGAGGTACGTGGTGCACATACCTGAAAGCCTGCCAATGGACGCAACAGCGCCGTTGCTGTGTGCCGGAATAACAGTGTTCACGCCGATGAAAGATCTCGGCCTGATCGAGTCAGCGGGAAAGAAGGTGGGAGTGGTGGGGCTTGGAGGTCTGGGCCACATAGCAGTAAAATTTGCAAAGGCGTTTGGACACCATGTGACTGTGATCAGCACCTCTGCTTCAAAGGAACAAGAAGCTAAGGAGCGGCTTGGCGCTGACGATTTCATAGTCAGTAAAGATCCTGAGCAAATGCAGAGTTATAAGAGGACGTTGGATTTCATATTGGACACAGTGTCGGCGCAGCACTGTATTGGACCAATCTTAGAACTGCTAAAAGTGAATGGGACATTGTCCATTGTGGGAGCTCCAGACAAGCCCATTCAGTTGCCCTCTTTTCCTTTAATATTTGGGAAGAGGACAGTGAAGGGAAGCATAATAGGTGGAATACAAGAGACACAAGAGATGATGGATTTGTGTGGGAAATACAAAATTACAAGTGATATTGAAGTGATTAAGCCAGAAGATATCAACCATGCTATGGACCGTCTTCTCAAAAGCGATGTTCGATATCGATTTGTCATTGACATTGCCCAAAACATAATCCAATAA 1080 46.48 MAQTTPNHTQTVSGWAAHDSSGKISPYTFKRRENGPEDVTIEILYCGICHTDIHYAKNEWGITMYPVVPGHEMTGVITKVGSNVEKFKIGDRVGVGCIAASCLNCEFCQDSQENYCENLQFTYNGIFWDGSITYGGYSKMFVSDQRYVVHIPESLPMDATAPLLCAGITVFTPMKDLGLIESAGKKVGVVGLGGLGHIAVKFAKAFGHHVTVISTSASKEQEAKERLGADDFIVSKDPEQMQSYKRTLDFILDTVSAQHCIGPILELLKVNGTLSIVGAPDKPIQLPSFPLIFGKRTVKGSIIGGIQETQEMMDLCGKYKITSDIEVIKPEDINHAMDRLLKSDVRYRFVIDIAQNIIQ 359
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 25588395 25590890 - CmPI595203_05g015940.1 Cmu05g1594 416508
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1594 359 Gene3D - 166 323 - -
Cmu05g1594 359 FunFam probable cinnamyl alcohol dehydrogenase 15 175 - -
Cmu05g1594 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cmu05g1594 359 Gene3D - 15 353 - -
Cmu05g1594 359 SMART PKS_ER_names_mod 22 351 IPR020843 GO:0016491(InterPro)
Cmu05g1594 359 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Cmu05g1594 359 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cmu05g1594 359 Pfam Alcohol dehydrogenase GroES-like domain 35 153 IPR013154 -
Cmu05g1594 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Cmu05g1594 359 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Cmu05g1594 359 SUPERFAMILY GroES-like 17 180 IPR011032 -
Cmu05g1594 359 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0078 Cmu-Chr2:821810 Cmu05g1594 Cmu-Chr5:25588395 2.20E-118 dispersed
Cmu02g0079 Cmu-Chr2:834258 Cmu05g1594 Cmu-Chr5:25588395 1.40E-120 dispersed
Cmu02g0670 Cmu-Chr2:6730979 Cmu05g1594 Cmu-Chr5:25588395 4.40E-95 dispersed
Cmu05g1594 Cmu-Chr5:25588395 Cmu05g1138 Cmu-Chr5:10827768 1.30E-99 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1594 K00083 - csv:101213170 670.233