Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1597 ATGCAAACCATTTCTTTATTTGTCTTTTTGGTTTTGGTTCTTTCCGAAAATGCTAAAATAGCTGAAGCTGCTGAAGGTGGAATAAATGGCGTTTATATTGTCTACATGGGATCCGCGTCTGCCTCCACGACTGACTTCCTTCGGCTTCTTACCTCTGTCAACAGGCGAAACGAAGTGGTACACATATATAAACATGGGTTCATAGGATTTGCAGCTCGTCTGTCAGAACAGGAAGCCCATGCCATGAGACAAAGCCCTGGAGTTGTTTCGGTTTTTCCAGATCCAATATTGAAGTTGCACACAACTCATTCATGGGATTTCTTGGTTAGTCAGACTAGCGTCAAAATCGACGCCAATCCCAAATCAGATCCCCCAACCTCTTCCTCTCAACAATATGATACCATTATCGGCATCTTGGACACTGGTATCTGGCCAGAATCGGAAAGTTTTAGTGACAAGGGTCTGAGCCCAATACCGTCGAGGTGGAAAGGTACCTGCATGGTTGGCGATGACTTCACTTCCTCCAACTGTAACAGAAAAATCATTGGAGCAAGATTTTACGAAAGTTCAGACAGCGACGGGATAAGGTACCACTCACCTCGAGACGGAGCTGGACATGGCACCCACGTTGCATCAACGGCGGCCGGCAGCGCCGTGGCTAATGCATCATACTATGGCCTCGCAGAAGGGACGGCCAAGGGCGGGTCCCCCGGCTCAAGGATCGCCATGTACAGAGTCTGCGTGGCCGACGGCTGTCATGGGTCGTCAATCATGAAGGCGTTTGATGATGCCATCGCCGATGGGGTCGATGTATTGTCCTTATCTCTCGGGGCACCCTCCTACGTCAAACCAGAGTTGACGGCCGACCCTATTGCCATTGGAGCCTTTCATGCAGTTGAGAAGGGGATTACAGTTGTCTGCTCCGCTGGAAACGACGGCCCCACTTCGGGATCGGTGGTTAACGACGCACCGTGGATAATAACAGTGGCTGCCTCCACCATTGATAGGGATTTTGAGTCTGATGTTGTGTTGGGCAACAAAAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTTCAAAAGTCTCCTGTATACCCACTGATACAAGGCAAGTCAGCCAAGAAAGCGAGTGCCAGTGAAGACAGTGCAAGGATTTGTTCTGAAGACTCCATGGACGAAGCTCAAGTGAAGGGAAAGATAGTTATTTGTGAAAACAGTTTCGAAGGAGGCGGTTCTGATTGGCAAGGTCAGGCTGAAACAGTGAAGAATCTTGGAGGGGTCGGGGTAGTTTTGATTGATGACAACTCAAAATTAGTTGCAGAGAAATTTCCTTCTCCCATGACAGTTATTAGCAAAAAGGATGGTGCTGAGGTCCTCTCCTATGTTAAATCAAGCAGGAATCCAGTTGCTACAATCCTGCCCACTGTGACCATAATAAACTATAAGCCAGCGCCTGCTATAGCATACTTTTCATCCCGAGGGCCTAATCTCGCAGTATTAAACCTGATTAAGCCGGACATATCAGCACCAGGAGTGAACATTCTTGCAGCCTGGCTTGGCAATGATTCAAGCTCTACTCCACAAGCAACAAAGTCACCACTTTTCAATGTGATCTCAGGAACTTCAATGTCCTGCCCGCATGTCTCTGGCGTAGTGGCCTATGTAAAATCTCAAAACCCCACATGGAGTCCCTCAGCAATTAAATCGGCCATCATGACCACAGCAATTCAAACAAATAACTTGGGATCGCCAATGACTTTGGATACGGGATCAATAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACCAACGGAGCATTACAACCAGGACTAGTTTATGAAACTAGTACAACAGACTACTTAAACTACCTTTGCAGCCGAGGTTATAACCGGTCCACCATTAAGAACATCTCAACTACTGTTCCTGATGGGTTTGATTGCCCCAAGAATTCAACTGTAGACTACATATCCAACATGAACTACCCATCAATTGCAGTATCCGAATTGAAAGGCAAGGAAAGCAAGAAAGTAACAAGAACGGTTACGAATGTTGGTGGTGCTGGTGAAACAGTTTACACAGTCAGCATAGACGCACCTGAGGAAGTAGATGTCAAAGTGATTCCAGACAAATTGAAATTTGGAAAGAACAATGAGAAGCAGAGTTACCAAGTGATTTTCACCCCAACTGTACCCACACTGCAGAAAGAAGTCCCTGGTTCAATAACTTGGACCAATGGAAAATATCGAGTCCGGAGTCCATTTGTCGTCACTAGTAAGAGTAGTGAGTCATAA 2301 46.37 MQTISLFVFLVLVLSENAKIAEAAEGGINGVYIVYMGSASASTTDFLRLLTSVNRRNEVVHIYKHGFIGFAARLSEQEAHAMRQSPGVVSVFPDPILKLHTTHSWDFLVSQTSVKIDANPKSDPPTSSSQQYDTIIGILDTGIWPESESFSDKGLSPIPSRWKGTCMVGDDFTSSNCNRKIIGARFYESSDSDGIRYHSPRDGAGHGTHVASTAAGSAVANASYYGLAEGTAKGGSPGSRIAMYRVCVADGCHGSSIMKAFDDAIADGVDVLSLSLGAPSYVKPELTADPIAIGAFHAVEKGITVVCSAGNDGPTSGSVVNDAPWIITVAASTIDRDFESDVVLGNKKVIKGEGINFSALQKSPVYPLIQGKSAKKASASEDSARICSEDSMDEAQVKGKIVICENSFEGGGSDWQGQAETVKNLGGVGVVLIDDNSKLVAEKFPSPMTVISKKDGAEVLSYVKSSRNPVATILPTVTIINYKPAPAIAYFSSRGPNLAVLNLIKPDISAPGVNILAAWLGNDSSSTPQATKSPLFNVISGTSMSCPHVSGVVAYVKSQNPTWSPSAIKSAIMTTAIQTNNLGSPMTLDTGSIATPYDYGAGEISTNGALQPGLVYETSTTDYLNYLCSRGYNRSTIKNISTTVPDGFDCPKNSTVDYISNMNYPSIAVSELKGKESKKVTRTVTNVGGAGETVYTVSIDAPEEVDVKVIPDKLKFGKNNEKQSYQVIFTPTVPTLQKEVPGSITWTNGKYRVRSPFVVTSKSSES 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 25643527 25647989 + CmPI595203_05g015970.1 Cmu05g1597 416511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1597 766 Pfam Peptidase inhibitor I9 31 100 IPR010259 -
Cmu05g1597 766 Gene3D - 627 762 - -
Cmu05g1597 766 FunFam Subtilisin-like protease SBT1.5 133 345 - -
Cmu05g1597 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 758 IPR045051 -
Cmu05g1597 766 Gene3D - 335 480 - -
Cmu05g1597 766 Pfam Fibronectin type-III domain 661 759 IPR041469 -
Cmu05g1597 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 100 IPR037045 -
Cmu05g1597 766 Gene3D Peptidase S8/S53 domain 133 623 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu05g1597 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Cmu05g1597 766 ProSitePatterns Serine proteases, subtilase family, histidine active site. 206 216 IPR022398 -
Cmu05g1597 766 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Cmu05g1597 766 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Cmu05g1597 766 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Cmu05g1597 766 CDD PA_subtilisin_like 341 473 - -
Cmu05g1597 766 Pfam Subtilase family 134 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu05g1597 766 SUPERFAMILY Subtilisin-like 131 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu05g1597 766 Pfam PA domain 386 457 IPR003137 -
Cmu05g1597 766 ProSiteProfiles Serine proteases, subtilase domain profile. 104 610 - -
Cmu05g1597 766 FunFam subtilisin-like protease SBT1.5 335 480 - -
Cmu05g1597 766 CDD Peptidases_S8_3 97 577 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1597 Cmu-Chr5:25643527 Cmu08g1009 Cmu-Chr8:22332287 1.90E-172 dispersed
Cmu05g1597 Cmu-Chr5:25643527 Cmu10g1221 Cmu-Chr10:5013084 5.80E-153 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1597 K25898 - csv:101213415 1318.52