Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1658 ATGCCCGCGCTTACAAGCTCTGGTCGGCGCGCAAAGAGCTTTTCACTTCGTCGGTTGACGGACAAAGCCATGGCTCGCCGCCATAGCCAAGCTCAACCGTCCTGTTGGAAGCGTGTGCTACAGTTAATCGAGTGCTTTTTCGTGCAATTTCTCGTGCGATTGGTCTCTCTCGTGATTGATATGGGTATTTACCTCAGCAATCCCAAAACAGAGAAGTCCTCTGAAGATGGTGAGAATAGACGGCTTAGATATGGACTATCGTCTATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAGTTCCTGATCTGGATGCCTGCACTTCCTTCTTTGGTGTTTATGATGGCCATGGAGGTAAGGTGGTTGCAAAGTTCTGTGCCAAGTACCTACATCAGCAGGTGAAGAAAAATGACACTTTTGCGGCTGGAGATATAGGAACTTCTGTGCAGAAAGCATTCTTCAGAATGGATGAAATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTGTTTTGGGTGATAGATTGAACAAGTTCACTGGCATGATAGAAGGGTTAATCTGGTCCCCAAAAAGCAGTGATGCAAATGACCTGGCTGATGATTGGGCTTTTGAGGAGGGTCCACACTCTGATTTTACTGGCCCAACTTCCGGGTGTACAGCTTGTGTTGCAATTATTAGAAATAACAAACTAGTTGTTGCAAATGCTGGTGATTCTCGCTGTGTGCTATCAAGAAAGGGCCAGGCCCACAGTCTCTCTAGAGATCACAAGCCTGATCTTGAGGCTGAGAAGGATAGAATTCTGAAAGCTGGTGGTTTTATTCATGCTGGACGAGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGACATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAAGCAAATTATTACTGCAAACCCTGATGTAACCACTGTTGAGCTTTGCGACGATGATGAGTTTATTGTGATAGCTTGTGATGGTATATGGGATTGCATGTCTAACCAGCAACTGGTAGATTTTATACATGAACAGCTAAAATCAGAAACTAAACTCTCTGTGGTTGTTGAGAGAGTACTTGATAGGTGTTTGGCACCTTCCACTGCTGGTGGTGAGGGATGTGATAACATGACCATGATTTTGGTGCAGTTTAAGAAAGATAATCAATCAAACTCCCCCATAGATGGCCAAACTTCACCTGCCGCCACTGCCTGTGCCAAACCAGACAGTACCGAATCGATGCAGAAAGATGAATTGAGCCACAGACTTTGA 1287 45.14 MPALTSSGRRAKSFSLRRLTDKAMARRHSQAQPSCWKRVLQLIECFFVQFLVRLVSLVIDMGIYLSNPKTEKSSEDGENRRLRYGLSSMQGWRATMEDAHAAVPDLDACTSFFGVYDGHGGKVVAKFCAKYLHQQVKKNDTFAAGDIGTSVQKAFFRMDEMMRGQRGWRELAVLGDRLNKFTGMIEGLIWSPKSSDANDLADDWAFEEGPHSDFTGPTSGCTACVAIIRNNKLVVANAGDSRCVLSRKGQAHSLSRDHKPDLEAEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQQLVDFIHEQLKSETKLSVVVERVLDRCLAPSTAGGEGCDNMTMILVQFKKDNQSNSPIDGQTSPAATACAKPDSTESMQKDELSHRL 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26579653 26588305 - CmPI595203_05g016580.1 Cmu05g1658 416572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1658 428 MobiDBLite consensus disorder prediction 394 428 - -
Cmu05g1658 428 SMART PP2C_4 73 387 IPR001932 -
Cmu05g1658 428 ProSitePatterns PPM-type phosphatase domain signature. 112 120 IPR000222 GO:0043169(InterPro)
Cmu05g1658 428 MobiDBLite consensus disorder prediction 394 415 - -
Cmu05g1658 428 Gene3D - 60 390 IPR036457 -
Cmu05g1658 428 CDD PP2Cc 83 389 IPR001932 -
Cmu05g1658 428 PANTHER PROTEIN PHOSPHATASE 2C 70 390 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cmu05g1658 428 Pfam Protein phosphatase 2C 83 164 IPR001932 -
Cmu05g1658 428 Pfam Protein phosphatase 2C 215 373 IPR001932 -
Cmu05g1658 428 SUPERFAMILY PP2C-like 63 390 IPR036457 -
Cmu05g1658 428 ProSiteProfiles PPM-type phosphatase domain profile. 83 389 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1658 Cmu-Chr5:26579653 Cmu09g0464 Cmu-Chr9:4310254 3.60E-35 dispersed
Cmu05g1658 Cmu-Chr5:26579653 Cmu09g0322 Cmu-Chr9:3047075 1.00E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1658 K17499 - csv:101211604 682.559