Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1659 ATGCAGGCAGATCAGACGGTGATAAGTTTGAGACCTGGTGGTGGCGGTGGCTTTCGTGGAAGCAGATTTGTTACACCTCGCTTCGATTCATCCTCCGCCGACTCTTCGTCGCTTCGTCCACATGGCGGCGCTGCTTCAATCCTCAAGACTGGCGATCTACGGTTTGAAGGTCGTGAGCGAATGCAATACACTCGAGACCAGCTTCTGCAGCTTAGGGAGGTTGCAACAGTCCCTGAGGATATCTTGAAAGTCAAACTAGAAGTTGAGTCAGAGATAGTTGGGGAAGATCAAACATGGGCCCGTGCTGAAAGCAATCAGCAATCACAATCTCAAGGCCGTTACTTTGAGGCAGACAATCGAGATTGGCGTGGTCGATCTGGACAGTTACCCGGCTCCACAGAGGAAGGATCTTGGGAAGCAAACAAGGATTTGTCTGGACAATCTGAGTTGAGGTTCCAAGACTCAAATAATAGGAATCAAGTTTCTGGTAACCAAGGGGTTGGCACTGCACCTGCTCTCATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGATAAGGAACGAGTTTTGAAGACAGTTAAAGGTATACTGAATAAATTGACTCCAGAAAAGTTTGACATACTCAAAGGTCAACTGATTGACTCAGGAATTACATCCGCTGATATTTTGAAGGATGTTATATCGCTTATATTTGAGAAGGCCGTATTTGAGCCCACATTTTGCCCTATGTATGCACTTTTGTGCTCTGACCTCAACGAGAAGCTTCCTTCATTTCCATCCGAAGTGCCTGGAGAGAAAGATATCACTTTTAAACGTGTTCTCTTAAATATTTGCCAAGAGGCATTTGAAGGTGCTGATAACATGAGGGCAGAAATCAGGCAGATGACTAGTCCTGAGCAGGAAACGGAAAGAAGAGATAAAGAAAGAATGGTTAAGCTTCGAACTCTAGGAAACATTCGCCTGATAGGTGAGCTTCTGAAACAGAAGATGGTGCCTGAAAAGATTGTTCACCATATTGTTCTGGAGCTGTTGGGGCCTGACCCTAAAATATGCCCTGCAGAGGAGAATGTCGAGGCTATTAGTCAGTTTTTTAACACAATAGGTAAGCAACTGGATGAGAGCCCAAAATCTCGACGGGTCAATGATGTATATTTCAGCCGTTTGAAGGAGCTCACTGCAAACACCCAATTAGCACCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTGCGGGCCAATAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCGAAAACCATCACTGAAATTCATTCAGAGGCTGAAAAGAATCTAGGGCTCCGTCCAGGTTCAATGGCAATGATGAGAAATGGCCGTAATACCGAGGCACTTGGGGGATTAAGTCCTGGTGGTTTTCCAGTTGCCCGACCTGGCTTTGGAGGTATGATGCCTGGAATGCCAGGAACCAGGAAAATGCCTGGGATGCCTGGACTTGAGTCAGACAATTGGGAAGTTCCCAGATCCCGAGTAATGCCAAGGGGCGAAACCGGAGGTCCTATTGCGCGCGGCCAGTCATCATTAACGGGCAAAACACCTTCCATTAATTCAAAATATTTACCTCAGGGAAGTGGAGGTGTAATAACAGGGAAAACAAGTGCCTTGCTACAGGGTAGTGCCGCTGCATCTCCTGCCCGACCACCGAGTTCCATGCCTGGAACTCAGCCTGTTCCTCACAACCCTAAACCAGTTGCTCCAGTTACACCTATCATATCTTCGCCTCCGAAGCCTGTAGCTCCTGCTGCATCCAATCTGGTTGATCTTCGCAAGAAAACCGTTTCGCTGCTTGAGGAATACTTCAGCGTACGGATTCTTGATGAAGCTCTACAGTGTGTAGAGGAGCTGAAATCCCCAGCTTATCACCCTGAGGTTGTTAAAGAATCTCTTACCATTGCACTTGAGAAGATTCCACCATGTGTAGACCCAGTTGTTAAACTTCTTGAGCACTTGCTTCACAAGAATGTCTTGACTGAAAAGGATATAGGTACCGGGTGCCTTCTATATGGGTCGATGATGGATGATATCGGCATTGATCTACCAAAAGCACCAAGCAATTTCGGTGAGATTCTCGGGAAGTTAATTTTGATCAGAGGTCTGGATTTCGCTGTTGTGAAGGAGATTCTTAAGAAGGTGGAAGATAACTACTTGCAAAAATCCATTTTTGGTGGTGCTATGAAGATCCTCAACTCTAGCCCTTCTGGAGAAGGAATTCTGGCAACTCAAAGCGTTGAGATCCAGGCATGTGAGACTTTACTTGCGTGA 2313 46.17 MQADQTVISLRPGGGGGFRGSRFVTPRFDSSSADSSSLRPHGGAASILKTGDLRFEGRERMQYTRDQLLQLREVATVPEDILKVKLEVESEIVGEDQTWARAESNQQSQSQGRYFEADNRDWRGRSGQLPGSTEEGSWEANKDLSGQSELRFQDSNNRNQVSGNQGVGTAPALIKAEVPWSVRRGNISDKERVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFPSEVPGEKDITFKRVLLNICQEAFEGADNMRAEIRQMTSPEQETERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDPKICPAEENVEAISQFFNTIGKQLDESPKSRRVNDVYFSRLKELTANTQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGSMAMMRNGRNTEALGGLSPGGFPVARPGFGGMMPGMPGTRKMPGMPGLESDNWEVPRSRVMPRGETGGPIARGQSSLTGKTPSINSKYLPQGSGGVITGKTSALLQGSAAASPARPPSSMPGTQPVPHNPKPVAPVTPIISSPPKPVAPAASNLVDLRKKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKESLTIALEKIPPCVDPVVKLLEHLLHKNVLTEKDIGTGCLLYGSMMDDIGIDLPKAPSNFGEILGKLILIRGLDFAVVKEILKKVEDNYLQKSIFGGAMKILNSSPSGEGILATQSVEIQACETLLA 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26597370 26602507 - CmPI595203_05g016590.1 Cmu05g1659 416573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1659 770 Gene3D - 185 420 - -
Cmu05g1659 770 SMART if4_15 194 419 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cmu05g1659 770 MobiDBLite consensus disorder prediction 99 115 - -
Cmu05g1659 770 SUPERFAMILY ARM repeat 601 756 IPR016024 -
Cmu05g1659 770 FunFam Eukaryotic translation initiation factor isoform 4G-2 185 420 - -
Cmu05g1659 770 Pfam MIF4G domain 194 419 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cmu05g1659 770 Gene3D - 602 758 - -
Cmu05g1659 770 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 49 768 IPR045208 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER)
Cmu05g1659 770 MobiDBLite consensus disorder prediction 519 538 - -
Cmu05g1659 770 SUPERFAMILY ARM repeat 187 422 IPR016024 -
Cmu05g1659 770 MobiDBLite consensus disorder prediction 1 44 - -
Cmu05g1659 770 ProSiteProfiles MI domain profile. 604 726 IPR003891 -
Cmu05g1659 770 SMART ma3_7 605 717 IPR003891 -
Cmu05g1659 770 MobiDBLite consensus disorder prediction 25 39 - -
Cmu05g1659 770 MobiDBLite consensus disorder prediction 509 538 - -
Cmu05g1659 770 MobiDBLite consensus disorder prediction 555 575 - -
Cmu05g1659 770 Pfam MA3 domain 605 716 IPR003891 -
Cmu05g1659 770 MobiDBLite consensus disorder prediction 99 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1659 Cmu-Chr5:26597370 Cmu06g0833 Cmu-Chr6:10611888 6.70E-48 dispersed
Cmu05g1659 Cmu-Chr5:26597370 Cmu06g1308 Cmu-Chr6:24228078 2.40E-279 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1659 K03260 - csv:101211356 1310.43