Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1671 ATGAACCTTAAGCTCCAATCTTCATTTTCTGCTTATTTGGATCTCAACCCCAATTTCACAATGGCTTTATTTCGCAAATTCTTTTATCGAAAGCCACCGGACGGGCTTTTAGAGATATCCGAAAGGGTTTATGTTTTCGACTGTTGCTTTACAACGGAGGTTTTGGAAGAAGACGAATACAAGGTCTATATTGGAGGGATTGTTGGGCAACTTCGTGAGAGTCTCACCGACGCTTCATTCATGGTGTTCAATTTCCGAGAAGGGGAGAATCATAGCCTCGTTACTAATATATTATCTGTATATGATATGACTGTCATGGACTATCCTCGACATTATGAAGGCTGTCCTCTACTCACTATGGAGATGATCCACCACTTTTTAAGATCCAGTGAAAGCTGGCTCTCACTTGGCCAACAGAATGTACTTTTGATGCACTGTGAAAGAGGGGGGTGGCCAGTCTTGGCTTTCATGTTGGCCGCTCTTCTGATTTACAGGAAGCAGTATGCTGGGGAGCAGAAAACTTTGGACATGATTTACAAGCAAGCACCGCGGGAACTTTTGCAGTTGATGTCACCTCTTAATCCATTGCCTTCACAGTTGAGGTATCTTCAATATGTATCAAGAAGAAATGTGGCCTCAGAATGGCCTCCTCTTGACAGGGCTCTTACTCTAGACTGCATAATTATTAGATTTATTCCTAATATGGATGGGGAGGGTGGTTGCCGCCCAATATTTAGAATATACGGACAGGATCCCTTTATGGCTGCTGATCGAACTTCCAAAGTATTGTTCTCAACCCCCAAAAAGAGTAAACTTGTTCGGCAGTATAAGCAGGTAGATTGTGAACTAGTTAAAATTGATATCCATTGCCATATCCAAGGTGATGTTGTTCTTGAATGTATAAGTTTGGACAATGATCTGGAAAGGGAGGAGATGATGTTTCGAGTTATGTTTAACACAGCATTTATAAGGTCAAATATTTTAATGCTTAACCGTGATGACATTGATATTTTATGGCACGCAAAGGATCAATTTCCAAAGGATTTCAGAGCAGAGGTTCTTTTTTCAGAGATGGATGCTTCCGCATCACTTATTTCAGTTGAGTTGCCAAATATTGAGGAGAAAGATGGTCTTCCAATTGAAGCATTTGCTAGAGTTCAAGAGATCTTTAGCAATGTGGACTGGCTAAGCCCAAAGGCAGATGCAGCTCTTAATGTGCTTCAGAAAATAACAGCTTCAAATTTACTTCAAGAGAAACTGGTTAGTTCCGGCTCTTTAGATAGAAACCAGTTGCTCGACTTATCTGTTGAAAAACTAATCTTGGAATCAGAGACATCTGAAGACAATATTGGAAGTCCCCGATTGAAGATACAGACAAAAAAATCTCAGCCTTCTTCCGAACTATCTCAGGCTGCAGGTTCAGAGAGATCAAAGATTGATCCCTCAGAATTGCAGGTTGCTCTCCAACTACCACCTCAGTCTAAAATCATCACCCAAAGAATACCTCAACCTTCATTGTCTACGCCGGCCTCCTTCCGTAGTTCTATGCAAGGTTCACCTCGCCCTATATTAAGATATCACAGTGCACCCTCAGCTCTTGGCATTACAGCTTTATTACAAGATCATTCCAATTTTAGTGGTAAAGAAGTCATACATCCAGCGACAATATCTTCACCATCATCTGCTTTCTTGAGTTCAAGTGGTCTAGATTCACTTAAAGATATTCAACCTTGTATGCTTCCTATTTTGCCTCTCCCGCTAGCAATAGAGCCAAGATCTACATCAGAAAATTCTTCGACCACTGCGTCAACTTCAACCTCTCCCGATCCATTGTCACTTCACCAACTTTCTTTGAAACCTATTAAATCTTCAATTTCTCAACCTCCTCAAGCCACATCACGGGTGAGAAGTCAATTATCACCGTCTTCATTACAACCAACTTCTACCTCTTTTCCTGAGGAGTCCCCACCCTCCTTCAATGAGAGCGAAGCTTCAAGAACCTCTTCCTCTTGTTTGTTAATATCATCTCCATCTTCTTGTACTAAGGAATCATTTTCCATCTCCACCCCTCCCCCTCCCCCTCCCCCCCCTCCTCCTCTTCCCCATCTTGATTCACCTTTGGCTTTAGTAACTTCTCCGTCTTCTAGTAGGGAAAACAGTATTTTCCCATCCTCACCACAACCTCCTTCTACAACACTACTGTTATCCTCTACAAATACATCAATTCCATCTGTTCCTCAATTTTCTTCATCTGATGATTGTCTAGTTTCTTCTCAGTCACCTAAAAAGAACTTGACGAGTGTCTCTCCCCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCATGTTGTAGCCCTAACTTGGGCGCTAGTGTTGCCTCGCCAACACCAGTGCCCCCACCCCCACCTCCACCTCCTTCATGGAAGGATGCTACAGACACATTCATGCTTGATCCCCCACCTCCACCTCCAGCCCCACCCTTGCCTCCATCTTCTTTCAGTTCAACATCTACTTGTGACTCTAGTATCACGCCTTTAGGGCCACCACCGCCACCACCACCTCCTCCTAGTCATGCACCACAAGATTTTGCCACTGTAGTTAGGAACTTGATGGCTGTATCTGGCCCTCCACCTCCCCCACCTCCCCCACCTCCTCCATCTCATTCTTCTCTAGATCCTAATACTGTATCTTCAGTACCGCCGCCGCCACTCCCTCCTAGTCTTGCACCAAATGTTTCTACAACAACTGTTAACTTGACACATGTCTCTGGCCCCCCTCCTCCTCCTCCACCACCTTTTGCAAATTCTGGTCCCACCTTATGTCCAGGTGCTGTAACGTCAGCTCCTCCTGCTCCGCCTCCTCCAGGTTTCTCAATGAAGGGTTCTGCAACACATGCTCCACCTGCACCCCCTCCTCCAGGTCTCAGTGGTAATAAACTCTCAAATGTCAATGGTACTTCCTCACAGTCTCACGTTGGCATTAATAACAGCAACATACCTTCTGTTCCTGGACCACCTTCCAGCGCTCTATTCAATGCCAAGGGACGGGGCCTTGGACGTTTGAACTCCAAAAACCAGTCTCAACCTAAAAGGTCCAATTTGAAGCCATATCATTGGTTAAAATTAACGAGGGCCATGCAAGGAAGCTTATGGGCAGAGACACAAAAGACTGATGAAGCTTCCAAAGCTCCGGAGTTTGACATGTCCGAACTTGAAAGTCTTTTCTCTGCAGCTGCACCAAATTCAGACTCCGGAGGTTCGGGTGGAAATTCAAATCGCCGAGCCTCAGGGCCAAAATCAGATAAAGTTCATTTGATTGAACTTCGACGGGCCTATAATTGTGAAATTATGCTTTCTAAAGTTAAGATTCCTTTGCCGGATATGATGTGTTCAGTCCTTGCATTGGATGATTCGGCATTAGATGTGGATCAGGTTGAGAACCTAATCAAGTTTTGTCCAACAAAGGAAGAGATGGAATTACTTAAGGGGTACAATGGGGATAAGGACAACTTGGGAAAATGTGAACAATTCTTTTTAGAGTTGATGAAAGTCCCACGAGTAGAGTCCAAGCTAAGGGTTTTTTCTTTCAAGATACAATTCCGATTGCAGGCCTGTGACCTTAGAAATAGTCTGAATACTATCAATTCGGCATCTGAAGAGATCAGAAGTTCGGTAAAGTTGAAAAGGGTAATGCAAACGATCCTTTCATTGGGTAATGCTTTGAACCACGGAACGGCCAGAGGTTCTGCTATTGGATTTCGACTTGATAGTCTCCTCAAACTCACTGATACACGAGCCAGAAACAATAAGATGACTCTCATGCATTATCTATGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTTCCAAAGGACCTTGTTAGTTTGGAAGCTTCTACAAAGATACAACTGAAATACTTGGCAGAGGAAATGCAAGCCATAAGCAAAGGGCTTGAGAAGGTCGTTCAGGAATTGGCTAATTCAGAGAACGATGGGCTCGTTTCAGGAACTTTTTGCCGGACTTTAAAAGACTTTCTTTCTCATGCTGAGGCCGAAGTGAGGTCTCTTGCCTCTCTTTATTCTAATGTGGGTAGAAATGCTGATGCATTGGCTCTCTATTTCGGCGAAGATCCAGCACGTTGCCCTTTTGAGCAAGTTGTTTCTACACTGTTCAATTTCGTGAGGATGTTTGTACGAGCGCATGAAGAAAACTGTAAGCAACTTGATTATGAAAAGAAGAAAGCACAGAAGGAAGCTGCAGAAAAGGAGAAGTTGAAACTCAATACCACAAAGAAGGAGTCAGGATTCTTGATGCAGACTCCGACCTAG 4338 43.96 MNLKLQSSFSAYLDLNPNFTMALFRKFFYRKPPDGLLEISERVYVFDCCFTTEVLEEDEYKVYIGGIVGQLRESLTDASFMVFNFREGENHSLVTNILSVYDMTVMDYPRHYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYAGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVASEWPPLDRALTLDCIIIRFIPNMDGEGGCRPIFRIYGQDPFMAADRTSKVLFSTPKKSKLVRQYKQVDCELVKIDIHCHIQGDVVLECISLDNDLEREEMMFRVMFNTAFIRSNILMLNRDDIDILWHAKDQFPKDFRAEVLFSEMDASASLISVELPNIEEKDGLPIEAFARVQEIFSNVDWLSPKADAALNVLQKITASNLLQEKLVSSGSLDRNQLLDLSVEKLILESETSEDNIGSPRLKIQTKKSQPSSELSQAAGSERSKIDPSELQVALQLPPQSKIITQRIPQPSLSTPASFRSSMQGSPRPILRYHSAPSALGITALLQDHSNFSGKEVIHPATISSPSSAFLSSSGLDSLKDIQPCMLPILPLPLAIEPRSTSENSSTTASTSTSPDPLSLHQLSLKPIKSSISQPPQATSRVRSQLSPSSLQPTSTSFPEESPPSFNESEASRTSSSCLLISSPSSCTKESFSISTPPPPPPPPPPLPHLDSPLALVTSPSSSRENSIFPSSPQPPSTTLLLSSTNTSIPSVPQFSSSDDCLVSSQSPKKNLTSVSPPPPPPPPPPPPPPCCSPNLGASVASPTPVPPPPPPPPSWKDATDTFMLDPPPPPPAPPLPPSSFSSTSTCDSSITPLGPPPPPPPPPSHAPQDFATVVRNLMAVSGPPPPPPPPPPPSHSSLDPNTVSSVPPPPLPPSLAPNVSTTTVNLTHVSGPPPPPPPPFANSGPTLCPGAVTSAPPAPPPPGFSMKGSATHAPPAPPPPGLSGNKLSNVNGTSSQSHVGINNSNIPSVPGPPSSALFNAKGRGLGRLNSKNQSQPKRSNLKPYHWLKLTRAMQGSLWAETQKTDEASKAPEFDMSELESLFSAAAPNSDSGGSGGNSNRRASGPKSDKVHLIELRRAYNCEIMLSKVKIPLPDMMCSVLALDDSALDVDQVENLIKFCPTKEEMELLKGYNGDKDNLGKCEQFFLELMKVPRVESKLRVFSFKIQFRLQACDLRNSLNTINSASEEIRSSVKLKRVMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELANSENDGLVSGTFCRTLKDFLSHAEAEVRSLASLYSNVGRNADALALYFGEDPARCPFEQVVSTLFNFVRMFVRAHEENCKQLDYEKKKAQKEAAEKEKLKLNTTKKESGFLMQTPT 1445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26685547 26700240 + CmPI595203_05g016710.1 Cmu05g1671 416585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1671 1445 Gene3D Formin, FH2 domain 1019 1411 IPR042201 -
Cmu05g1671 1445 ProSiteProfiles C2 tensin-type domain profile. 219 358 IPR014020 -
Cmu05g1671 1445 PANTHER FORMIN-J 21 1426 IPR051144 -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 817 832 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 1020 1034 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 766 787 - -
Cmu05g1671 1445 SMART PTEN_C2_2 217 357 IPR014020 -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 845 861 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 1079 1097 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 923 938 - -
Cmu05g1671 1445 Pfam C2 domain of PTEN tumour-suppressor protein 219 357 IPR014020 -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 874 910 - -
Cmu05g1671 1445 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 32 207 IPR029021 -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 591 1040 - -
Cmu05g1671 1445 Gene3D - 216 361 - -
Cmu05g1671 1445 Coils Coil 1401 1436 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 1079 1101 - -
Cmu05g1671 1445 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1025 1426 IPR015425 -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 457 476 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 708 765 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 457 481 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 794 810 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 591 686 - -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 687 704 - -
Cmu05g1671 1445 SUPERFAMILY Formin homology 2 domain (FH2 domain) 951 1420 - -
Cmu05g1671 1445 SMART it6_source 690 1445 IPR015425 -
Cmu05g1671 1445 Gene3D Protein tyrosine phosphatase superfamily 20 211 IPR029021 -
Cmu05g1671 1445 Pfam Formin Homology 2 Domain 1027 1400 IPR015425 -
Cmu05g1671 1445 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 221 358 IPR035892 -
Cmu05g1671 1445 MobiDBLite consensus disorder prediction 978 1006 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1244 Cmu-Chr4:26934156 Cmu05g1671 Cmu-Chr5:26685547 4.60E-246 dispersed
Cmu05g1671 Cmu-Chr5:26685547 Cmu06g1648 Cmu-Chr6:27607055 1.90E-250 dispersed
Cmu07g0281 Cmu-Chr7:2802147 Cmu05g1671 Cmu-Chr5:26685547 1.40E-258 transposed
Cmu05g1671 Cmu-Chr5:26685547 Cmu06g1291 Cmu-Chr6:24087381 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1671 K28090 - csv:101214019 2149.01