Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1793 ATGAAAATCCAAACTTTTCTTTTTCTTCTTCTTTCAACTTGCTGTTTTGCTCAGCTTCACTTCAACTATTACCATAATTCATGTCCAAATGTTGAGTCCATTGTAAGAGATGCAGTGAAACAAAAATTTCAACAAACTTTTGTCACTGCCCCTGCCACTCTAAGGCTCTTCTTTCATGATTGTTTTGTCAGGGGTTGTGATGCTTCTGTGTTGATTCAAACAAACAACCACACTTCAGAGAAAGATAATGCAGAGAATCTTTCACTCGCTGGAGACGGGTTCGACACCGTGATCAAAGCTAAAGCTGCTGTCGATAGCGTGCCGGGATGTAAGAATAAGGTCTCTTGTGCTGACATATTGGCTTTGGCTACTAGAGATGTTGTAGTTTTGACAGGAGGACCGTCGTATGCCGTCGAGTTGGGAAGACGAGACGGGCGGATCTCGACAAGAAAGAGCGTTCGACACCATCTTCCTCAGCCTGATTTTGGATTAAATCAACTCAATGCCATGTTTGCAAAACATGGTCTAACTCAAACAGACATGATTGCTCTCTCAGGTGCACATACAATTGGATTCTCACATTGCAAGCATTTCTCCAAAAGGCTATATAGTTTCCACAGCAAAAACAGAATCGACCCGACGTTCAATCCAAAGTACGTTGATGAGCTCAAGAAGGAATGCCCGAGAAACGTCGACCAGAGAATCGCGGTCGACATGGACTCGACATCATCGTTCACATTCGACAACATGTACTTCAAGAATCTACAAATGGGAAAAGGACTGTTCACCTCAGACCAAGTATTGTTCACTGATCCAAGATCAAGAAAAACAGTGAACTTATTTGCTTCCAACAATACAGCTTTTGAGGAGGCATTTGTAGTTGCAATGACAAAGCTTGGGAGAGTTGGAGTCAAAACAAGAAACCAAGGGGAGATTAGAGTTGACTGTTCATCAGTGAACTAA 963 42.37 MKIQTFLFLLLSTCCFAQLHFNYYHNSCPNVESIVRDAVKQKFQQTFVTAPATLRLFFHDCFVRGCDASVLIQTNNHTSEKDNAENLSLAGDGFDTVIKAKAAVDSVPGCKNKVSCADILALATRDVVVLTGGPSYAVELGRRDGRISTRKSVRHHLPQPDFGLNQLNAMFAKHGLTQTDMIALSGAHTIGFSHCKHFSKRLYSFHSKNRIDPTFNPKYVDELKKECPRNVDQRIAVDMDSTSSFTFDNMYFKNLQMGKGLFTSDQVLFTDPRSRKTVNLFASNNTAFEEAFVVAMTKLGRVGVKTRNQGEIRVDCSSVN 320
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 28057743 28059108 - CmPI595203_05g017930.1 Cmu05g1793 416707
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1793 320 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 Gene3D - 22 320 - -
Cmu05g1793 320 SUPERFAMILY Heme-dependent peroxidases 18 320 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 FunFam Peroxidase 22 166 - -
Cmu05g1793 320 FunFam Peroxidase 158 299 - -
Cmu05g1793 320 PANTHER - 7 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601(InterPro)
Cmu05g1793 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cmu05g1793 320 Pfam Peroxidase 35 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 ProSiteProfiles Plant heme peroxidase family profile. 18 320 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu05g1793 320 Gene3D Peroxidase, domain 2 158 299 - -
Cmu05g1793 320 CDD secretory_peroxidase 18 319 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1793 Cmu-Chr5:28057743 Cmu11g0771 Cmu-Chr11:8195461 1.80E-103 dispersed
Cmu05g1793 Cmu-Chr5:28057743 Cmu01g1374 Cmu-Chr1:27216670 4.70E-72 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1793 K00430 - csv:101218982 613.224