Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1911 ATGGCTGATGGAGGATCAGTTTCTGGGTCAAGAATGTGGTGTTCAATTCCTGAGAAGCTTCAACTGCATGGCGCCATGTTGGCCTTGCAATTTGGCTATGCTGGCTTCCACGTTGTCTCAAGGGCTGCTCTTAATATGGGCATTAGTAAACTTGTCTTCCTAGTTTATAGGAACATCATTGCCTTTTTGCTTCTACTTCCCTTTGCATATTTCCTCGAAAAGAAAGAGCGCCCTCCCATTACTTTCAATTTTCTCCTTCAGTTCTTCCTCCTTGCCCTTGTTGGAATCACGGCAAACCAAGGGTTCTACTTGCTAGGTTTGGAGAACACGTCCCCGACGTTTGCATCAGCTATACAAAACTCTGTTCCGGCCATTACATTCCTCATGGCTGCATTGCTCAGAATAGAAGAAGTGCGACTAAACAGAAAAGATGGTATAGCAAAAGTGATTGGAACGATATGCTGTGTTGCTGGGGCCACAGTGATCACTCTGTACAAAGGTCCAACAATATACAGCCCAGTTCATTCACTACAAACAGCTGCCACCACCACTAGCGCACCCATTTTCGCTTCTCTTGGGGACGCAACCGGGAAAAGCTGGACCCTTGGCTGTGTCTTTTTGATCGGTCATTGCTTGTCTTGGTCTGGATGGCTTGTTTTGCAAGCACCCGTTTTGAAAAAATACCCAGCTCGTCTCTCTGTCACTTCTTATACTTGTTTCTTTGGGATAATCCAATTTATCATCATCGCTGCCATTGCGGAGCGAGATGTTGAGGCTTGGCTCTTTCACTCCGGTGGTGAAATCTTTAGCGTCCTGTATGCGGGAGTGGTAGCTTCGGGAATTGCTTTCGCAGTGCAGACATGGTGTATTCAAAGAGGTGGGCCTGTGTTCGTTGCTGTTTACCAACCAGTTCAGACTTTGGTTGTCGCTGTCATGGCTTCCTTCGCCTTGGGTGAAGAGTTCTTCTTGGGAGGGATCATCGGGGCGGTATTGATCATCGCCGGCTTATACTTCGTCTTATGGGGCAAAAGCGAAGAGAGAAAATTTGCACTTGAGAAGGCTGCAATCCTCTCCACTCCGGACCACACTAACAACAGAACACCCCCACTCATCAAGCCCTCTATTACTCAGCCACTTCTCATCCACTCATCAAACGACAACGTTTGA 1167 47.3 MADGGSVSGSRMWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFLLLLPFAYFLEKKERPPITFNFLLQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAALLRIEEVRLNRKDGIAKVIGTICCVAGATVITLYKGPTIYSPVHSLQTAATTTSAPIFASLGDATGKSWTLGCVFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFIIIAAIAERDVEAWLFHSGGEIFSVLYAGVVASGIAFAVQTWCIQRGGPVFVAVYQPVQTLVVAVMASFALGEEFFLGGIIGAVLIIAGLYFVLWGKSEERKFALEKAAILSTPDHTNNRTPPLIKPSITQPLLIHSSNDNV 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29014223 29017004 + CmPI595203_05g019110.1 Cmu05g1911 416825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1911 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 345 - -
Cmu05g1911 388 PANTHER WAT1-RELATED PROTEIN 25 352 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu05g1911 388 Pfam EamA-like transporter family 202 340 IPR000620 GO:0016020(InterPro)
Cmu05g1911 388 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020(InterPro)
Cmu05g1911 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1911 Cmu-Chr5:29014223 Cmu06g1512 Cmu-Chr6:26391978 1.70E-105 dispersed
Cmu05g1911 Cmu-Chr5:29014223 Cmu08g1406 Cmu-Chr8:26226469 2.00E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1911 - - - 0.0