Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1972 ATGGATAGAAATAATGGGCGTCGGAAGGGTGATTGGGTAAGGGAGTATTGGGAGGCACAGTTGCCGAGGGGGGAAGTGTCTCAGCGGGGAGCGTTACCTAAAGAGAGGGGTGCGTCCGAGTTGGAGTCCGCCGGAAGAAGGAAGTCTGGTGGGGAGAGGAACCCAATGGGTTTGGGCCGCATTTTCAGAGACTCTAATGGTCCGATGGTGATGCCTTTCTCATTATCCGTTCATACGGGGATGGATGTGCTGGTTGTCGAGGCTTTGGCTTTCTTCGTAGGTCTTGTTTTTGTCGGAATCGTCTTCAAATTTGTGTACGCCAATTTATGGGTTCCGTGGAGAATTCAAACCCACTTCAAAAACCAAGGGATAACAGGGCCTTCCTACCGTCCGATCATCGGTAACGCCACCGATATCCGCCGTCTGTACAAGGAGGCGAATGCGAAACCAATTCCGCTGACCCACAATATAGTGTGTCGGGTGCTGCCTTATATTCACCGGTGGTCCGAGGAGTACGGGAAGATGTTTGTGTATTGGTTCGGGTCGAAACCGAGGTTGGCGATATCCGACCCAGAAATGATTAAGGAGGTGCTTACCAATACGGGTGGGCCTTTTAGAAAGGTCGGGTTCACCCCGGTTTCCAAGTTGCTGTTTGGAGAAGGACTTGTTGGACTCGAGGGCGAACAATGGGTCGTCCACCGGAGAATCGCAAATCAGGCTTTCACTATCGACCGTGTGAAGGGGTGGTTACCAGAGATTGCGTTGAGTGTTTGTAATGTGTTGGAGAAATGGGAAGAGATGAAGGGAGGAAGGGAGGAGTTTGAATTAGATGTCCATAAACAACTTCGTCTCCTCACAGCAGACGTAATTTCAAGAACTGCTTTTGGAAGTAATTTTGAAGAAGGCAAACGCATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTCCAGGCCGTCTCAAGTGTTTATATTCCAGGCTACAGATTTTTGCCTACCAAGGGGAATAGAGAGAGGGAGAGGCTGGAAAAAGAAACTCGTGCATCAATAAAAGCACTAGTCGAAAGTGAGAAAAATAGCAAAGAAAGGGAAGACTCAACAAATCTACTCAGCCTCTTACTGTCATCTTACAAGAACCAAAATGGGGAAATAGAAAAACTTGGAGTGGAGGAAGTTGTAAATGAATGCAAGACATTCTACTTTGCAGGGATGGAAACAACTGCCAATCTTTTAACTTGGGCCCTTTTACTACTAGCACAGCATCAAGAATGGCAAGATCGAGCTCGACAAGAAGTCATCAATGTTTGCGGCCACAAGACACCGCCCGTGGCCGATAATCTAACTGAACTTAAACTAGTGGGTATGATAGTTAATGAAACACTTCGACTTTATCCTCCTGCGGTGATGATGATGCGACGGACAACAAAACGGTTGACACTAGGAAAGGTCGACGTGCCAGAAGGCACACAACTTCAACTTTCAATTGCTGCAATCCACCATGACACAGAGCTTTGGGGAGAAGATGCGAGCAGCTTCAACCCTATGAGATTTAGTGAGCCTAGGAAGCATCTAGCTTCATTTTTGCCATTTGGATTGGGTCCAAGAATTTGTGTAGGGCAACATTTGGCTCTGATTGAGGCCAAAGTTGCATTGGCTATGATAATTCAGCGATTCTCTTTTACGATTTCTCCAACCTACACGCATGCCCCTATGATGTTTGTAAGCTTAAACCCTCAATTTGGTGTTCAACTCCTTGTTAGGAGCTTATGGAATTGA 1776 46.51 MDRNNGRRKGDWVREYWEAQLPRGEVSQRGALPKERGASELESAGRRKSGGERNPMGLGRIFRDSNGPMVMPFSLSVHTGMDVLVVEALAFFVGLVFVGIVFKFVYANLWVPWRIQTHFKNQGITGPSYRPIIGNATDIRRLYKEANAKPIPLTHNIVCRVLPYIHRWSEEYGKMFVYWFGSKPRLAISDPEMIKEVLTNTGGPFRKVGFTPVSKLLFGEGLVGLEGEQWVVHRRIANQAFTIDRVKGWLPEIALSVCNVLEKWEEMKGGREEFELDVHKQLRLLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLQAVSSVYIPGYRFLPTKGNRERERLEKETRASIKALVESEKNSKEREDSTNLLSLLLSSYKNQNGEIEKLGVEEVVNECKTFYFAGMETTANLLTWALLLLAQHQEWQDRARQEVINVCGHKTPPVADNLTELKLVGMIVNETLRLYPPAVMMMRRTTKRLTLGKVDVPEGTQLQLSIAAIHHDTELWGEDASSFNPMRFSEPRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTISPTYTHAPMMFVSLNPQFGVQLLVRSLWN 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29503155 29507757 + CmPI595203_05g019720.1 Cmu05g1972 416886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1972 591 Gene3D Cytochrome P450 113 585 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 MobiDBLite consensus disorder prediction 35 49 - -
Cmu05g1972 591 MobiDBLite consensus disorder prediction 26 59 - -
Cmu05g1972 591 SUPERFAMILY Cytochrome P450 122 587 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS P450 superfamily signature 402 419 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS P450 superfamily signature 537 548 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS P450 superfamily signature 528 537 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 530 539 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu05g1972 591 PRINTS E-class P450 group I signature 391 408 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS E-class P450 group I signature 527 537 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS E-class P450 group I signature 169 188 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS E-class P450 group I signature 537 560 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS E-class P450 group I signature 411 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS E-class P450 group I signature 193 214 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PRINTS E-class P450 group I signature 285 303 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 Pfam Cytochrome P450 165 566 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1972 591 PANTHER CYTOCHROME P450 FAMILY MEMBER 104 582 IPR050665 GO:0004497(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1970 Cmu-Chr5:29491401 Cmu05g1972 Cmu-Chr5:29503155 3.30E-146 dispersed
Cmu05g1972 Cmu-Chr5:29503155 Cmu11g0268 Cmu-Chr11:3230001 2.10E-118 dispersed
Cmu05g1971 Cmu-Chr5:29496629 Cmu05g1972 Cmu-Chr5:29503155 3.20E-293 tandem
Cmu05g1972 Cmu-Chr5:29503155 Cmu05g1973 Cmu-Chr5:29511060 8.20E-22 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1972 - - - 0.0