Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1989 ATGAAGAAGACGTCGAAAGTTGTAGATGAGGTATTTGATAAGTGGCTGGAAGAGCATCGTCAAAGGAAAATGGAGAGTAATAATAATAAAGGAGAGGATTTCATGGATGTGTTGATTTCTATGGTTAAAGATGATGATGAACAACTTTTTGGCTATGTTGGAGACTCAGTCATCAAGGCCACTTGTTTGGCTATGGTATTGGCTGGATTTGATACTACAGCAATAACAATGACATGGGCTCTTTCTTTACTTCTCAACAATCAAGAAATGCTTAAGAAGGCCCAACTTGAGTTAGAAGAACAAGTTGGGACACAAAAACAAGTGAGAGAGTCCGACGTAAAAAATCTAGAATATCTTCAAGCTATTGTGAAGGAAACATTACGTCTTTATCCTGCTGCACCACTCTCAATCCCTCATGAGTCAATGGAAGATTGTTCTATTTTTGGCTACCACATTCCTTCAAGAATACGCCTAATAGTAAACCTTCAAAAGCTTCAAAGAGATCCACTTGTTTGGAAGGATCCTAATGAATTTCGACCAGAAAGATTTCTAACAACTCAAAAGGACTTTGATGTTAGAGGCCAAAGTCCTCAACTAATTCCATTTGGGAGTGGTCGAAGAATGTGTCCAGGAATATCATTTTCCCTCCAAATTATACATCTTACACTCGCAAATCTACTTCATGGATTTGAAATTGATAGGCCATCAAAAGATTTAGTTGATATGGAGGAGAGTATCGGATTGACCAGTACTAAAAAATCTCCCCTTGAGGTTGTTTTAGCTCCACGCTTGCCTGCTCGAGTTTATGAATGA 813 38.38 MKKTSKVVDEVFDKWLEEHRQRKMESNNNKGEDFMDVLISMVKDDDEQLFGYVGDSVIKATCLAMVLAGFDTTAITMTWALSLLLNNQEMLKKAQLELEEQVGTQKQVRESDVKNLEYLQAIVKETLRLYPAAPLSIPHESMEDCSIFGYHIPSRIRLIVNLQKLQRDPLVWKDPNEFRPERFLTTQKDFDVRGQSPQLIPFGSGRRMCPGISFSLQIIHLTLANLLHGFEIDRPSKDLVDMEESIGLTSTKKSPLEVVLAPRLPARVYE 270
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 29653104 29654393 - CmPI595203_05g019890.1 Cmu05g1989 416903
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1989 270 PRINTS P450 superfamily signature 121 132 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 PRINTS P450 superfamily signature 200 209 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 PRINTS P450 superfamily signature 68 85 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 PANTHER CYTOCHROME P450 82C3-RELATED 1 266 IPR050651 -
Cmu05g1989 270 Pfam Cytochrome P450 2 252 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 FunFam Uncharacterized protein 1 265 - -
Cmu05g1989 270 Gene3D Cytochrome P450 1 261 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 PRINTS E-class P450 group I signature 199 209 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 PRINTS E-class P450 group I signature 57 74 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 PRINTS E-class P450 group I signature 77 103 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 PRINTS E-class P450 group I signature 161 185 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 PRINTS E-class P450 group I signature 120 138 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 PRINTS E-class P450 group I signature 209 232 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 SUPERFAMILY Cytochrome P450 2 263 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1989 270 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 202 211 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1989 Cmu-Chr5:29653104 Cmu05g1994 Cmu-Chr5:29698655 3.70E-110 dispersed
Cmu05g1988 Cmu-Chr5:29644276 Cmu05g1989 Cmu-Chr5:29653104 1.70E-100 tandem
Cmu05g1989 Cmu-Chr5:29653104 Cmu05g1990 Cmu-Chr5:29657491 1.00E-64 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1989 - - - 0.0