Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1991 ATGGTGGGATTCCAGAGGTCAAATGGGACATCCAGATTCATCATCATGGCATTTGAAAAGGCATCGGGTCTCAAAATAAATCTTTCAAAATCTTATGTGAGAAGAACAGGCATAGACCACAATATCCTCCTCATGGCCTCTCCTTCCTCTGATGAAGAACCCGATACCATCCTTTGGAAACCGGGCAACAATGGTTTGGAGGAACTCTACCAATTTGTGGACAGATCTGCTTCGGTTCCTGTCTCCCTGGATCCGTGCTTAAAAAGTTTTGCTGCAGCAAACCAGCCTCAAAAAGAAAATATCCTCCTTCAAAATCTGATTGGCGCTACCCTTTGGAGCATATGGCTGGAGAGGAATGACAGAACCTTCCATGGTCATGGTGGTGGTGGTGGAGCACTCAAGAAGGCTCAACTTGAATTAGACGAACAAGTTGGAAGAGAAAGACAAGTAAAAGAGTCAGATCTGAAAAATCTACCCTATCTCCAAGCTATTGTTAAGGAAACTCTACGGTTGTATCCTGCTGCACCGCTCTTAGTTCCTCATGAATCCATAGAAGATTGCATAGTTGTTGGTTATCACATCCCCAAAGGGACACGCCTCATAGTTAATGTTCAAAAGCTTCAGAAAGACCCACGTGTTTGGGAGGATCCTTGTGAATTTCGTCCCGAAAGGTTTCTAACAACTCAAACAAATTTTGATGTTAGAGGACAAAGTCCCCAATTGATACCATTTGGTAATGGGCGAAGGATGTGCCCTGCAATTTCATTTGCCCTTCAAATAATCCATCTTACACTTTCAAACTTTCTTCATGGATTTGAAATTGATCGGCCATCAGAAGAACTGCTTGACATGGAAGAGAGTATTGGATTGACAAGCCTTAAAAAAACTCCACTCCAAGTTGTGTTAACTCCACGCCTACCTTCCCAAGTTTACGAGTAA 939 42.92 MVGFQRSNGTSRFIIMAFEKASGLKINLSKSYVRRTGIDHNILLMASPSSDEEPDTILWKPGNNGLEELYQFVDRSASVPVSLDPCLKSFAAANQPQKENILLQNLIGATLWSIWLERNDRTFHGHGGGGGALKKAQLELDEQVGRERQVKESDLKNLPYLQAIVKETLRLYPAAPLLVPHESIEDCIVVGYHIPKGTRLIVNVQKLQKDPRVWEDPCEFRPERFLTTQTNFDVRGQSPQLIPFGNGRRMCPAISFALQIIHLTLSNFLHGFEIDRPSEELLDMEESIGLTSLKKTPLQVVLTPRLPSQVYE 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29661170 29669847 - CmPI595203_05g019910.1 Cmu05g1991 416905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1991 312 Gene3D Cytochrome P450 131 307 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1991 312 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 244 253 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu05g1991 312 PANTHER CYTOCHROME P450 82C3-RELATED 132 308 IPR050651 -
Cmu05g1991 312 SUPERFAMILY Cytochrome P450 133 305 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1991 312 Pfam Cytochrome P450 134 294 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1991 312 PRINTS E-class P450 group I signature 241 251 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1991 312 PRINTS E-class P450 group I signature 251 274 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1991 312 PRINTS E-class P450 group I signature 203 227 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1991 312 PRINTS E-class P450 group I signature 162 180 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0689 Cmu-Chr2:7052142 Cmu05g1991 Cmu-Chr5:29661170 1.50E-12 dispersed
Cmu05g1991 Cmu-Chr5:29661170 Cmu05g1995 Cmu-Chr5:29704270 6.10E-85 dispersed
Cmu05g1990 Cmu-Chr5:29657491 Cmu05g1991 Cmu-Chr5:29661170 1.10E-33 tandem
Cmu05g1991 Cmu-Chr5:29661170 Cmu05g1992 Cmu-Chr5:29670511 2.30E-87 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1991 - - - 0.0