Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1992 ATGGATGTGATGATTTCAACAGTTAGAGATGACAATGGACAACATTTTAGCTACGATGACGATACAGTCATCAAAGCTACATGTTTGAATATGATATTGGGTAGGTTTGACACTACAACGATAACAATGACATGGGCTATTTCATTACTCCTCAACAATGAACAAGTACTAAGAAGAGCTCAACTTGAATTAGACAATCAAGTGGGAAGAGAAAGACACGTAAAAGAGTCAGATGTGAAAAATCTATCATATCTCCAAGCTATTATTAAGGAAACTCTACGGTTGTATCCTGCTGCACCACTCTTAGCCCCTCATGAATCCATAGAAGATTGCACGACTGCTGGCTACCACATCTCCAAAGGGACACGCCTGATAGTTAATATTCAAAAGCTTCAAAAAGACCCACTTGTTTGGGAGGATCCTTGTGAATTTCGTCCAGAAAGATTTCTAACGACTCAAAAGGATTTTGATGTTAGAGGACAGTCTCCCCAATTGATACCATTTGGAAATGGTCGAAGGATGTGCCCTGGGATCTCTTTTGCCATCAAAATTATGCATCTTACACTTGCAAACTTTCTTCATGGGTTTGTGATTAATAGGCCATCAGAAGAACTGGTTGACATGGAGGAGAGTGATGGATTGACCAGCCTTAAAAAAGCTCCACTCCAAGTTGTTTTAACTCCACGTCTACCTGCCCATATTTATGAGTAA 711 39.8 MDVMISTVRDDNGQHFSYDDDTVIKATCLNMILGRFDTTTITMTWAISLLLNNEQVLRRAQLELDNQVGRERHVKESDVKNLSYLQAIIKETLRLYPAAPLLAPHESIEDCTTAGYHISKGTRLIVNIQKLQKDPLVWEDPCEFRPERFLTTQKDFDVRGQSPQLIPFGNGRRMCPGISFAIKIMHLTLANFLHGFVINRPSEELVDMEESDGLTSLKKAPLQVVLTPRLPAHIYE 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29670511 29671821 - CmPI595203_05g019920.1 Cmu05g1992 416906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1992 236 PRINTS E-class P450 group I signature 86 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PRINTS E-class P450 group I signature 127 151 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PRINTS E-class P450 group I signature 165 175 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PRINTS E-class P450 group I signature 23 40 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PRINTS E-class P450 group I signature 43 69 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PRINTS E-class P450 group I signature 175 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PRINTS P450 superfamily signature 34 51 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PRINTS P450 superfamily signature 166 175 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 SUPERFAMILY Cytochrome P450 1 229 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 Gene3D Cytochrome P450 1 231 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 Pfam Cytochrome P450 4 220 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1992 236 PANTHER CYTOCHROME P450 82C3-RELATED 1 232 IPR050651 -
Cmu05g1992 236 FunFam Uncharacterized protein 1 231 - -
Cmu05g1992 236 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 168 177 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1992 Cmu-Chr5:29670511 Cmu05g1995 Cmu-Chr5:29704270 1.10E-99 dispersed
Cmu05g1991 Cmu-Chr5:29661170 Cmu05g1992 Cmu-Chr5:29670511 2.30E-87 tandem
Cmu05g1992 Cmu-Chr5:29670511 Cmu05g1993 Cmu-Chr5:29682084 5.30E-105 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1992 - - - 0.0