Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1993 ATGAAAGAGACTGCACAATTATTAGACGAAGTGTTTCACAAATTCCTCCAACAACATCGAGAGAGGAGAGATCAGTCCAGTAAAGGGAAGACAATAGAAGAACAAGACTTCATGGATCTAATGATTTCTACTGTTGGAGATGAAGATGAACAACATTTCAGCTACGATACTGATACAATCATCAAAGCTACATCTTTGAATTTAATATTAGGTGGATTTGACACTACAGCAATTACAATGACATGGGCTCTTTCTTTACTTCTCAACAATGAAGAAGCATTGAGGAAGACTCAACTTGAATTAGACGAACAAATTGGAAGAGAAAGACAAGTGAAAGAGTCAGATGTAAAAAATTTATTATATCTCCAAGCTATCGTGAAGGAAACTCTACGGTTACATCCAGCTGGGCCACTCTTACTCCCTCATGAATCTATAAAAGATTGCACAATTGCTAACTACCACATCTCGAAAGGGACACGCCTCATTGTTAATGTACAAAAGCTCCAAAAGGACCCACTTGTTTGGGAACATGCCAATGAATTTCGACCCGAAAGATTTTTAACAAGCGAAAAGAATATTAATGTTAGAGGACAAAGTCTCGAATTGATACCATTTGGAAACGGTCGAAGGATGTGCCCTGCCATCTCATTTGCCCTTCAAATCATACATCTTACACTAGCCAACTTGCTACATGGGTTTAAAATTGATAGGCCATCAGAAGAACCTGTTGACATGGAAGAGAGTAATGGATTGGCCAGTGCTAGAAAGAGTCCACTCCAAGTTGTTTTAACTCCACGACTACCTGCCCATGTTTATGAGTAA 822 38.81 MKETAQLLDEVFHKFLQQHRERRDQSSKGKTIEEQDFMDLMISTVGDEDEQHFSYDTDTIIKATSLNLILGGFDTTAITMTWALSLLLNNEEALRKTQLELDEQIGRERQVKESDVKNLLYLQAIVKETLRLHPAGPLLLPHESIKDCTIANYHISKGTRLIVNVQKLQKDPLVWEHANEFRPERFLTSEKNINVRGQSLELIPFGNGRRMCPAISFALQIIHLTLANLLHGFKIDRPSEEPVDMEESNGLASARKSPLQVVLTPRLPAHVYE 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29682084 29684554 - CmPI595203_05g019930.1 Cmu05g1993 416907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1993 273 PANTHER CYTOCHROME P450 82C3-RELATED 1 269 IPR050651 -
Cmu05g1993 273 SUPERFAMILY Cytochrome P450 2 266 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 PRINTS P450 superfamily signature 124 135 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 PRINTS P450 superfamily signature 71 88 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 PRINTS P450 superfamily signature 203 212 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 205 214 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu05g1993 273 FunFam Uncharacterized protein 1 268 - -
Cmu05g1993 273 Pfam Cytochrome P450 2 255 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 PRINTS E-class P450 group I signature 212 235 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 PRINTS E-class P450 group I signature 80 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 PRINTS E-class P450 group I signature 60 77 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 PRINTS E-class P450 group I signature 123 141 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 PRINTS E-class P450 group I signature 164 188 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 PRINTS E-class P450 group I signature 202 212 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1993 273 Gene3D Cytochrome P450 1 268 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1993 Cmu-Chr5:29682084 Cmu05g1995 Cmu-Chr5:29704270 6.50E-99 dispersed
Cmu05g1992 Cmu-Chr5:29670511 Cmu05g1993 Cmu-Chr5:29682084 5.30E-105 tandem
Cmu05g1993 Cmu-Chr5:29682084 Cmu05g1994 Cmu-Chr5:29698655 9.10E-101 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1993 - - - 0.0