Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu05g1994 | ATGAGTGGTGCCTTCAGCGGTTGGAAGGTTCTTCGTGCATATAACATTGCAGTGCATGTACTGGCTCATAGGGGAGTTGTGAAATTGCGATGTTTATGGTTAGAGAAGCAAAATGAATGCAGCAGACATGGAATCTTCTCAACTCTCTTCATCGGCCACCGCCATTGCCGGAATCTTCTCCCTTCTCCTCTTTCTCTATGCTCTCTTCAACATATCTACAAGAATCATTCATTTCCATTTCTCAAGTGGTTGGATTTGGGAGGACATGAGAAGGCCATGAAGAAGACGGCTAAAATTCTTGACCAAGTGTTTGATAAATGGCTTCAAGAACATCGACAAAGGAAGAATTTTGAGGAGCATGACTTCATGGATGTGATGCTTTCTAATGTTGAAGATGGTGGAGAACAACTTTCAAGCTGCGATGCAGATACAATTGTCAAGTCTTCATGTTTGGCTCTCATACTGGCGGGTTCTGATACTACAACTGTAACTATGATATGGGCCCTTTCTTTATTGCTCAACAATCAAGAAGCACTCAAGAGAGCTCAACTTGAATTAGATGAACAAGTTGGGAGGCACAAACAAGTTAAAGAATCGGATGTAAGAAATCTTAAATATCTCCAAGCAATTGTGAAGGAAACATTGCGTTTATATCCTGCAGGACCACTTGGAATTCCTCATGAATCTATGGAAGATTGTAAAATTGTTGGCTACCATATTCCTGCAGGGACACGTCTCATTGTAAATATACAGAAGCTTCAAAGAGACCCACTTGTATGGGAAGATCCTTGTGAATTTCGACCAGAAAGATTTCTAACAAGTCACAAAGATTTCAAAATTAGAGGAAAAAGTCCTCAATTTATACCATTTGGAAATGGGCGGAGGATGTGTCCAGGAATCTCATTTGCCCTTCAAATTATGCATTTAACACTTGCAAATCTACTTCATGGGTTTGAGATTGAAAGGCCATCTAAAGAGTTACTCAATATGGAAGAAAGTGCTGGTATGACAAGCATTAAAAAAGACCCACTCCAAGTTATTTTAACTCCACGCCTCCAACCTCAAGTTTATGATTGA | 1077 | 40.02 | MSGAFSGWKVLRAYNIAVHVLAHRGVVKLRCLWLEKQNECSRHGIFSTLFIGHRHCRNLLPSPLSLCSLQHIYKNHSFPFLKWLDLGGHEKAMKKTAKILDQVFDKWLQEHRQRKNFEEHDFMDVMLSNVEDGGEQLSSCDADTIVKSSCLALILAGSDTTTVTMIWALSLLLNNQEALKRAQLELDEQVGRHKQVKESDVRNLKYLQAIVKETLRLYPAGPLGIPHESMEDCKIVGYHIPAGTRLIVNIQKLQRDPLVWEDPCEFRPERFLTSHKDFKIRGKSPQFIPFGNGRRMCPGISFALQIMHLTLANLLHGFEIERPSKELLNMEESAGMTSIKKDPLQVILTPRLQPQVYD | 358 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 29698655 | 29703155 | - | CmPI595203_05g019940.1 | Cmu05g1994 | 416908 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu05g1994 | 358 | Coils | Coil | 179 | 199 | - | - | |
| Cmu05g1994 | 358 | PRINTS | E-class P450 group I signature | 208 | 226 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PRINTS | E-class P450 group I signature | 249 | 273 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PRINTS | E-class P450 group I signature | 297 | 320 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PRINTS | E-class P450 group I signature | 145 | 162 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PRINTS | E-class P450 group I signature | 165 | 191 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PRINTS | E-class P450 group I signature | 287 | 297 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PRINTS | P450 superfamily signature | 209 | 220 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PRINTS | P450 superfamily signature | 288 | 297 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PRINTS | P450 superfamily signature | 156 | 173 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PRINTS | P450 superfamily signature | 297 | 308 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | SUPERFAMILY | Cytochrome P450 | 70 | 351 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | PANTHER | CYTOCHROME P450 82C3-RELATED | 74 | 353 | IPR050651 | - | |
| Cmu05g1994 | 358 | FunFam | Uncharacterized protein | 93 | 353 | - | - | |
| Cmu05g1994 | 358 | Gene3D | Cytochrome P450 | 53 | 355 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | Pfam | Cytochrome P450 | 78 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g1994 | 358 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 290 | 299 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu05g1989 | Cmu-Chr5:29653104 | Cmu05g1994 | Cmu-Chr5:29698655 | 3.70E-110 | dispersed | |
| Cmu05g1990 | Cmu-Chr5:29657491 | Cmu05g1994 | Cmu-Chr5:29698655 | 1.30E-63 | dispersed | |
| Cmu05g1994 | Cmu-Chr5:29698655 | Cmu05g1998 | Cmu-Chr5:29730347 | 1.40E-109 | dispersed | |
| Cmu05g1993 | Cmu-Chr5:29682084 | Cmu05g1994 | Cmu-Chr5:29698655 | 9.10E-101 | tandem | |
| Cmu05g1994 | Cmu-Chr5:29698655 | Cmu05g1995 | Cmu-Chr5:29704270 | 1.70E-118 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu05g1994 | - | - | - | 0.0 |