Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1995 ATGAAGAAGACTGCCAAAGTGCTTGATGAGGTGTTTGACAAATGGCTTCAAGAGCATCAACAAAAGAGGAATAATTTTGGCGAAGTACAGATGGAACAGCATGACTTCATGGATGTGATGCTTTCTAAAGTTAAAGATGACGGACAACTTCCTAAATATGATGCTCGTACTGTCACCAAGGCTACATGTTTGGCTCTTATATTGGCTGGATCTGACACTACAACAGTAACAATGATTTGGGCTCTTTCTTTACTTCTTAACAATCAAAAAGTGCTTAAGAAAGCTCAACTTGAATTGAACGAACATGTTGGAAGACAAAGACAAGTGAGAGAATTTGATATAAAGAATTTATTGTATCTTCAAGCTATTGTGAAGGAAACATTACGTTTGTATCCTGCCGCACCAATCCTGATCCCTCATGAATTAGTTGAGGATTGTATGGTTGCTGGTTACCACATCCCAGTAGGAACACGACTCATAGTTAATGTTCAAAAGCTTCAAAGAGACCCACAAATATGGGAGGATCCTTGTGAATTTCGACCAGAAAGATTTTTAACAAGTCAAAAAGATTTTGATGTTAAAGGACAAAGTCCTCAATTAATACCATTTGGAAGTGGTCGAAGAATGTGTCCTGGAATCTCGTTTGCTCTACAAGTTATGCATTTAACACTTGCAAATTTGCTTCATGGGTTCAACATTAGTAGGCCATCTGAAGAGCTTCTCAACATGGAAGAGAGTGCTGGAATGACAAGCATTAGAAAGAATCCACTTGAAGTTATTTTAACTCCTCGGCTCCCGGCTCAAGTTTATGAGTGA 816 38.48 MKKTAKVLDEVFDKWLQEHQQKRNNFGEVQMEQHDFMDVMLSKVKDDGQLPKYDARTVTKATCLALILAGSDTTTVTMIWALSLLLNNQKVLKKAQLELNEHVGRQRQVREFDIKNLLYLQAIVKETLRLYPAAPILIPHELVEDCMVAGYHIPVGTRLIVNVQKLQRDPQIWEDPCEFRPERFLTSQKDFDVKGQSPQLIPFGSGRRMCPGISFALQVMHLTLANLLHGFNISRPSEELLNMEESAGMTSIRKNPLEVILTPRLPAQVYE 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29704270 29705201 - CmPI595203_05g019950.1 Cmu05g1995 416909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1995 271 Pfam Cytochrome P450 2 255 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PANTHER CYTOCHROME P450 82C3-RELATED 1 267 IPR050651 -
Cmu05g1995 271 Gene3D Cytochrome P450 1 261 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS E-class P450 group I signature 58 75 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS E-class P450 group I signature 210 233 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS E-class P450 group I signature 78 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS E-class P450 group I signature 200 210 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS E-class P450 group I signature 121 139 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS E-class P450 group I signature 162 186 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS P450 superfamily signature 210 221 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS P450 superfamily signature 69 86 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS P450 superfamily signature 122 133 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 PRINTS P450 superfamily signature 201 210 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 FunFam Uncharacterized protein 1 266 - -
Cmu05g1995 271 SUPERFAMILY Cytochrome P450 2 264 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1995 271 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 203 212 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1991 Cmu-Chr5:29661170 Cmu05g1995 Cmu-Chr5:29704270 6.10E-85 dispersed
Cmu05g1992 Cmu-Chr5:29670511 Cmu05g1995 Cmu-Chr5:29704270 1.10E-99 dispersed
Cmu05g1993 Cmu-Chr5:29682084 Cmu05g1995 Cmu-Chr5:29704270 6.50E-99 dispersed
Cmu05g1995 Cmu-Chr5:29704270 Cmu05g1998 Cmu-Chr5:29730347 7.90E-105 dispersed
Cmu05g1994 Cmu-Chr5:29698655 Cmu05g1995 Cmu-Chr5:29704270 1.70E-118 tandem
Cmu05g1995 Cmu-Chr5:29704270 Cmu05g1996 Cmu-Chr5:29718728 2.10E-97 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1995 - - - 0.0