Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu05g1996 ATGAGGGATTTTTTTGATTTATTTGGGGTGTTTGTTCCGGGAGATTCGTTTCCATTTCTACGGTGGTTGGACTTGGGAGGACATGAAAAGACCATGAAGAAGACGGCCAAGGTCTTGGATGAGATGCTTAATAAATGGCTTAAAGAGCATAGACAAAAGGGAAATTCCATTGAGATTGACATGAAAGAGTATGATTTCATGGATGTCATGCTTTCTCTTGTTAAACATCACTCAAAACTTTCTAGCTACGACAATGATGATAGAATCACCAAAGCTACATGTTTGGCTATGATATTGGGTGGATTTGATACTACCGCAATAGCAATGCAATGGGCTCTTGCATTGCTTCTCAACAATTTAGAAACACTCAAGAAACTCCAACTTGAATTAGACAAACAAATTGGAAAAGGAAGAAAAGTGGAAGAGTCAGATGTGAAAAATCTATTATATCTCCAAGCCATAGTGAAGGAAACATTACGATTATACCCTGCAGTACCAATTGCACTCCCTCATGAATCTATAGAAAATTGTATAGTTGCTGACTATCACATCTCTACACAAACACGATTGCTAGTGAATCTTCAAAAGCTCCATAGAGACCCACTTGTTTGGGATGATCCTAATGAATTTCGACCTGAAAGATTTCTTAACCGAGAGCATCACTTCGATGTTAGAGGACAAAATCCTCAATTAATACCATTTGGAAGTGGTCGAATGATGTGTCCTGGAATCTCTTTTGCCCTCCAAATTGTGTGTTTCACACTTGCAAGTCTACTCCATATGTATGAAGTTGGTAGGCCATCAAATGAATTGATCGATATGGAGATGGGTGTTGGAGCAACGTGTATTAGAAAGAACCCTCTTGAAGTTGTTTTAAATCCACGTCTCCCGGCTGAAATTTATGAATATTTTTAA 915 38.25 MRDFFDLFGVFVPGDSFPFLRWLDLGGHEKTMKKTAKVLDEMLNKWLKEHRQKGNSIEIDMKEYDFMDVMLSLVKHHSKLSSYDNDDRITKATCLAMILGGFDTTAIAMQWALALLLNNLETLKKLQLELDKQIGKGRKVEESDVKNLLYLQAIVKETLRLYPAVPIALPHESIENCIVADYHISTQTRLLVNLQKLHRDPLVWDDPNEFRPERFLNREHHFDVRGQNPQLIPFGSGRMMCPGISFALQIVCFTLASLLHMYEVGRPSNELIDMEMGVGATCIRKNPLEVVLNPRLPAEIYEYF 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29718728 29720011 - CmPI595203_05g019960.1 Cmu05g1996 416910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu05g1996 304 FunFam Uncharacterized protein 32 297 - -
Cmu05g1996 304 SUPERFAMILY Cytochrome P450 2 295 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PANTHER CYTOCHROME P450 82C3-RELATED 1 298 IPR050651 -
Cmu05g1996 304 Pfam Cytochrome P450 12 275 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PRINTS E-class P450 group I signature 89 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PRINTS E-class P450 group I signature 109 135 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PRINTS E-class P450 group I signature 152 170 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PRINTS E-class P450 group I signature 231 241 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PRINTS E-class P450 group I signature 193 217 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PRINTS E-class P450 group I signature 241 264 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 Gene3D Cytochrome P450 1 293 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PRINTS P450 superfamily signature 100 117 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PRINTS P450 superfamily signature 232 241 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu05g1996 304 PRINTS P450 superfamily signature 153 164 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1996 Cmu-Chr5:29718728 Cmu05g1998 Cmu-Chr5:29730347 4.80E-127 dispersed
Cmu05g1995 Cmu-Chr5:29704270 Cmu05g1996 Cmu-Chr5:29718728 2.10E-97 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu05g1996 - - - 0.0