Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu05g2004 | ATGGAACGATGTCGTAAAGCGATGAGGGGGTTCTTTGAATTGGCGGGGCGAGTTACGGTGGGAGATGCGATTCCTTTTCTGAAATGGCTGGATTTGGGTGGTTATCTGAAGGCGACTAAGGAAGTTTTCAAAGAATTGGACTGTCTTATGGATGAATGGCTGGAAGAACATCGTCGGAAGAAGAGAGACGCCGGCGCCGGAGAGGATGAGGGGGAGGAGGATCTCATGGGAGTAATGCCATCGCTACTTGAAGGGATGGAGCTGGGTGGGTATGATGCTGATACAGTCAATAAAGCCACTTGTTTGACGCTTATTTCTGGAGGAACCGATACAATGACGGTAACTCTAACATGGGCAATCTCATTGTTACTAAACAACCAAGAGGCACTAAAAAGAGTGCAAGAGGAGTTAGACATCCATGTCGGAAACAAAAGGTTAGTGGATGAATCAGACATAAACAAACTAGAGTATCTCCAAGCTGTAATCAAAGAGACATTAAGGTTGTACCCAGCAGGGCCATTGTCGGGGGCTCGAGAGGTAAGCCAGGACTGCACAATTGGAGGCTACGATGTGGCAGCGGGCACACACCTCATTACAAACATTTGGAAGATACAACGAGACCCTCGAGTTTGGTCAGAGCCTTCAAAGTTCAAACCTGAAAGGTTTCTTAGTGGCCATAACTACAACCACATGGATGTGAAGGGTCAACATTTTGAACTGTCTCCATTTGGTTATGGAAGGAGGGCTTGCCCTGGGCCGGGGATTAGCCTATTGATGACGCAGTTGGTGTTGGCTAGGTTGATTCATTCGTTTGAACTTAGAACTCGTTGTGATGAACTGGTGGACATGACCGCCGACCTTGGGCTCACAATGCACCGAGTCAACCCTCTTCAAGTTATTATTAAGCCACGTCTTCTAGCTACTGCTTATGCATGA | 936 | 47.33 | MERCRKAMRGFFELAGRVTVGDAIPFLKWLDLGGYLKATKEVFKELDCLMDEWLEEHRRKKRDAGAGEDEGEEDLMGVMPSLLEGMELGGYDADTVNKATCLTLISGGTDTMTVTLTWAISLLLNNQEALKRVQEELDIHVGNKRLVDESDINKLEYLQAVIKETLRLYPAGPLSGAREVSQDCTIGGYDVAAGTHLITNIWKIQRDPRVWSEPSKFKPERFLSGHNYNHMDVKGQHFELSPFGYGRRACPGPGISLLMTQLVLARLIHSFELRTRCDELVDMTADLGLTMHRVNPLQVIIKPRLLATAYA | 311 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 29775779 | 29777228 | - | CmPI595203_05g020040.1 | Cmu05g2004 | 416918 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu05g2004 | 311 | FunFam | Uncharacterized protein | 39 | 306 | - | - | |
| Cmu05g2004 | 311 | SUPERFAMILY | Cytochrome P450 | 4 | 304 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PANTHER | CYTOCHROME P450 82C3-RELATED | 2 | 305 | IPR050651 | - | |
| Cmu05g2004 | 311 | Gene3D | Cytochrome P450 | 1 | 308 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PRINTS | E-class P450 group I signature | 240 | 250 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PRINTS | E-class P450 group I signature | 96 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PRINTS | E-class P450 group I signature | 200 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PRINTS | E-class P450 group I signature | 116 | 142 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PRINTS | E-class P450 group I signature | 159 | 177 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PRINTS | E-class P450 group I signature | 250 | 273 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | Pfam | Cytochrome P450 | 6 | 291 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PRINTS | P450 superfamily signature | 160 | 171 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PRINTS | P450 superfamily signature | 107 | 124 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | PRINTS | P450 superfamily signature | 241 | 250 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu05g2004 | 311 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 243 | 252 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu05g2004 | Cmu-Chr5:29775779 | Cmu01g1662 | Cmu-Chr1:30379301 | 4.60E-56 | dispersed | |
| Cmu05g2004 | Cmu-Chr5:29775779 | Cmu05g2010 | Cmu-Chr5:29829393 | 1.00E-24 | proximal | |
| Cmu05g2003 | Cmu-Chr5:29771690 | Cmu05g2004 | Cmu-Chr5:29775779 | 7.50E-111 | tandem | |
| Cmu05g2004 | Cmu-Chr5:29775779 | Cmu05g2005 | Cmu-Chr5:29789193 | 5.30E-121 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu05g2004 | - | - | - | 0.0 |